| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3297 |
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| Symbol | |
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| ID | 6162208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3663359 |
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| End bp | 3664801 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666072 |
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| Product | Beta-fructofuranosidase |
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| Protein accession | YP_001792320 |
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| Protein GI | 171059971 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CCGACCACCG CCCCCCCTGT TCCCACCGCC CGCAATACCA CTTCACCGCG
CCGCAGAACT GGATCAACGA CCCCAACGGC GTGTGCTTCC ACGCCGGCCG TTACCACCTC
TACTACCAGT ACAACCCGAA CGCCAGCAAG TGGGGCGACA TCCACTGGGG CCACGCCAGC
AGCGCCGACC TGGTCACCTG GCGCGACGAG CCGCTGGCGC TGGCGCCGTC GGCCGGGCCC
GACGCGGGCG GCTGCTTCTC CGGCAGCTTT GCGGTCGTCG ACGGGCTGCC CACCGTCTAC
TACACCGGCT ACACCACCGA GCGCCAGGTG CAGTGCGTGG CCACCAGCGC CGACCTGATC
CACTGGACCA AGCACCCCGA GCGCACGCTG GTGCAGCCGC CGGCCGGTGT CGAAGGCCAT
GATTTCCGCG ACCCCTACGT CTTCCGGCAC GACGGCCACT GGTACATGGC GCTGGGCGCG
TCGCTCGACC ATGAGCGCGG CCAGTGCCTG CTCTACCGCA GCGCCGACGG CATCCATTGG
GAAGACCGCG GCGTGCTCTA CGCTGCCGAG GACAGCCGCC TGGGCGTGAT GTGGGAGTGC
CCGAACTTCT TCCCGCTCGG CAGTCCTGGC CAAGAGAAGT GGGTGCTGAC TGTGTCGCTG
TGGCTGGGCC TGGGCGTCCA TGCGTTTGTC GGCCGCTTCG AGAACGAACG CTTCGTGCCC
GAATGGAGCG GCCCGCTCGA CGTCGATGCC GGTGCCTTCG CGCACCTGAC CACCCGCGTG
CCCGACGGCC GCACCCTGCA ATGGGCCTGG GCCAACGAGC AGCGCGAGCA GCCGCTGATC
GACGCCGATG GCTGGGCCGG CGCGATGACC GTGCCGCGCC AGCTGGGCCT GGACGCGCAA
GGCGGCCTGA CCCAGGCGCC GGTGGCCGAG GTGGCGTTGC TGCGCCAGGC CGAAGTGGCG
TTGCAGCCGG TGGCTGACGC GGCGCCCGCT CAGCGCTGGC GCTTTGCCGG CCGCCACCTC
GACATCGAGG CGCGCTTTGC GGCCCCCGGC CGCTACAAGG TCGGTCTCAC GCTGCTGGCC
AACCCGGCCG GCAGCGAAGT CACCCGCGTG GTCTATTGGC CCGAAGCGCG GCGCCTGAGC
ATCGAGCGCG GGCGCAGTTC GCTGGAACAC GGCGTCAAGC GCCAGGACGT TCATGCCCAC
CTGCTGCTGC AGCCGGGCGA GGACCTGACG CTGCGCGTGC TGCTCGACGG CAGCATGCTG
GAGGTGTTCG CCAACGACCG CGTCTGCCTG ACCACCCGCG TCTACCCCAC GGACCCGGCC
AGCGAGCTCG GCGAGGTCTA CAGCGAAGGC CCGGATGCGG TCGACTGCCG CGTCTGGGCG
ATGGGCTCGA TGTGGCCCGA GGGTCTGGTG CGCCCGCCGT TGGTCAAGCA GCCGGTGGCT
TGA
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| Protein sequence | MTQPDHRPPC SHRPQYHFTA PQNWINDPNG VCFHAGRYHL YYQYNPNASK WGDIHWGHAS
SADLVTWRDE PLALAPSAGP DAGGCFSGSF AVVDGLPTVY YTGYTTERQV QCVATSADLI
HWTKHPERTL VQPPAGVEGH DFRDPYVFRH DGHWYMALGA SLDHERGQCL LYRSADGIHW
EDRGVLYAAE DSRLGVMWEC PNFFPLGSPG QEKWVLTVSL WLGLGVHAFV GRFENERFVP
EWSGPLDVDA GAFAHLTTRV PDGRTLQWAW ANEQREQPLI DADGWAGAMT VPRQLGLDAQ
GGLTQAPVAE VALLRQAEVA LQPVADAAPA QRWRFAGRHL DIEARFAAPG RYKVGLTLLA
NPAGSEVTRV VYWPEARRLS IERGRSSLEH GVKRQDVHAH LLLQPGEDLT LRVLLDGSML
EVFANDRVCL TTRVYPTDPA SELGEVYSEG PDAVDCRVWA MGSMWPEGLV RPPLVKQPVA
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