| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3217 |
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| Symbol | |
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| ID | 6161459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3565327 |
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| End bp | 3567792 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665991 |
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| Product | Alpha-glucosidase |
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| Protein accession | YP_001792240 |
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| Protein GI | 171059891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC TGTCGGCCAT TCGCCCCATT CGCCGCATTC ACACCCTTCA CACCATGCGA
CTCGACCAAC CCCCCCGCTT CGCCCTCGAC ACCGCGTCCA CCGGCAACCA CCTGGTGCTG
CGCGCGCCCG ACGGTGCGCA GGCCCACGTG TTCGTGCTCG AGCACGACCT GCTGCGCCTG
CTGGTGCTGC CCGACGGCCA GCTGCATTTC CCGCGCACCT GGGCCATCGC GCCCGGGCTC
GACGACCTGC CGGCCGAAGG CCGCGACCGC CACGACCTGT CGGGCTTCTC GCTGCCGGAC
TTCGAACTGC AACACGACGC CGAGCGCGTG TGCGTCACCA CGCGCGACGT GCGCCTGACG
ATCGTGCTCG ACGGCCTGCG CTGCCGCTGG GAGGCGCGCC ATCTGGGCGA GTGGCAGCCC
GCGGCCACCG ACCGCTCGAC CCAGGCCTAC AACTTCGGCT GGTGGGATCA GCGTGTCTAC
CACTACCTCG AACGCGAGCG TGGCGAGATG TACTTCGGCT TGGGTGAGCG GTCGGGCGAC
GCCAACCGCG CCGGCCAGCG CTACCGCATG TGCAACCTCG ACCCGATGGG CTACAGCGCG
CGCAGCACCG ACCCGCTCTA CAAGCACATC CCTTTCTACC TGACGCGCAA GCCCGCCAGC
GGCCTGGTCT ACGGCCTTTT CTACGACACC CTGTCGGAGT GCAGCTTCGA CATGGGCCGC
GAGATGGACA ACTACCACGG CCCCTACCGC CACTTCGTCG CCGAGCACGG TGACCTCGAC
CTCTACTTCA TCGCCGGCGA CGGCCCGGCG GCGGTGACGC GGCGCTACAC CTGGCTGACC
GGCCGCCCGG TCTTCACGCC CCGCTATGCG CTCGGCTACT CGGGCTCGAC GATGAGCTAC
ACCGACGCAC CCGACGCCCA GCTGCGCATG GGCGAGTTCA TCGCGCGCTG CAGCGAGCAC
GACATCGCCT GCGAGTCCTT CCACCTGTCG TCGGGCTACA CCTCGATCGG CAACAAGCGC
TATGTCTTCA ACTGGAACCG CGACAAGTTC CCCGACCCCG CCGGCTTCGC CGCGTCCTAC
CTGGCGGCCG GCGTGCGCCT GTGCGCCAAC ATCAAGCCGG CGCTGCTGCA CGACCACCCG
CGCTTCGGCG AGGCGGCCGA GGCCGGCCTG CTGATCCGCG ATCCCGACGG CCAGCCGACG
GCGGTGCAGT TCTGGGACGA CACCGGCGCC TACCTCGACT TCACCAACCC GCAGACCATC
GCCTGGTGGA AGCAGCGTGT CACCGAGAGC CTGCTCGAGC CCGGCATCGC GGCGACCTGG
AACGACAACA ACGAATACGA GATCTGGAGC CGGCAGGCGC GCATCCATTT CTTCGGCGAG
CCGCGTGCCG CGGTCGAGGC CCGGCCGCTG CAGACGCTGC TGATGATGCA GGCCTCGCAC
CAGGCGCAGC GCGAATTCGC GCCCGACGAG CGGCCCTGGC TGGTGTCGCG CTCCGGCGCG
CCGGGCATGC AGCGCCACGT GCAGACCTGG TCGGGCGACA ACTACACCGC CTGGGAGACG
CTGCGCTACA ACATCCGCAT GGGCCTGGGC CTGGCGATCA GCGGCGTGTC GAACACCGGC
CACGACATCG GCGGCTTCTC GGGCCCGGCA CCCGGCCCCG AGCTGCTGCT GCGCTGGGTC
CAGCACGGCA TCTTCCTGCC GCGTTTCTCG ATCCACTCGT GGAACGACGA CGGCAGCGTC
AACGAGCCCT GGATGTACCC CGAGATCACG CCGCGCATCC GCGAGCTGAT CGGGCTGCGC
GCGCGCCTCA CGCCCTATCT CTACCAACTG CTGTGGCGCT CGCACGGCGC CTACGAGCCG
ATGATCCGGC CGACCTTCCA CGACTTCCCC GGCGATGCGC AGTGCTGGGA AGAAAGCGAC
GACATGCTGC TCGGCCCGGA CCTGCTGGTG GCGTCGGTGG TCGAGCCGGG GGCGACCGAG
CGGCGGGTCT GGCTGCCTGC CGGCAGTGAG TGGCTGGAGT TCTGGACCGG CCGGCGCCAT
GCCGGCGGCC AGTGGCTGAC GCTGGCGGCG CCGCTCGACA GCAGCGAGCC GCCGCTGCTG
GCGCGCGCCG GTTGCGCGAT CCCGCTCAAC CTGGCGCCGG CCCATTTCGG CAGCAGCGCC
GACGTGCGCG GTTTCCAGGT CTTTCCGCTG CGGCTCGGCC GTTTCGAGGC CGAGTGTTTC
GAGGACGACG GCCACAGCCA TGCCTGGCGC AGCGGCGCCC ACGGTTTCTG GTCGCTCGCA
CTCGACTGCA GCGAACAGGC CCTGCACCTG CAGGTGCAGC GGCGCGGCCC GCAGCCCCCG
GCGGCGCAGC CACTCGTGGT CCTGCTGCCG GCGGACGACC CGCGTGCGCT CGTCGTCGAG
GGCGCGACGA TCGGAGCCGA GGAGCGCTCC GGCGCGTGGC GCAGCGTCAC GCTGGACTGT
GCCTGA
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| Protein sequence | MKALSAIRPI RRIHTLHTMR LDQPPRFALD TASTGNHLVL RAPDGAQAHV FVLEHDLLRL
LVLPDGQLHF PRTWAIAPGL DDLPAEGRDR HDLSGFSLPD FELQHDAERV CVTTRDVRLT
IVLDGLRCRW EARHLGEWQP AATDRSTQAY NFGWWDQRVY HYLERERGEM YFGLGERSGD
ANRAGQRYRM CNLDPMGYSA RSTDPLYKHI PFYLTRKPAS GLVYGLFYDT LSECSFDMGR
EMDNYHGPYR HFVAEHGDLD LYFIAGDGPA AVTRRYTWLT GRPVFTPRYA LGYSGSTMSY
TDAPDAQLRM GEFIARCSEH DIACESFHLS SGYTSIGNKR YVFNWNRDKF PDPAGFAASY
LAAGVRLCAN IKPALLHDHP RFGEAAEAGL LIRDPDGQPT AVQFWDDTGA YLDFTNPQTI
AWWKQRVTES LLEPGIAATW NDNNEYEIWS RQARIHFFGE PRAAVEARPL QTLLMMQASH
QAQREFAPDE RPWLVSRSGA PGMQRHVQTW SGDNYTAWET LRYNIRMGLG LAISGVSNTG
HDIGGFSGPA PGPELLLRWV QHGIFLPRFS IHSWNDDGSV NEPWMYPEIT PRIRELIGLR
ARLTPYLYQL LWRSHGAYEP MIRPTFHDFP GDAQCWEESD DMLLGPDLLV ASVVEPGATE
RRVWLPAGSE WLEFWTGRRH AGGQWLTLAA PLDSSEPPLL ARAGCAIPLN LAPAHFGSSA
DVRGFQVFPL RLGRFEAECF EDDGHSHAWR SGAHGFWSLA LDCSEQALHL QVQRRGPQPP
AAQPLVVLLP ADDPRALVVE GATIGAEERS GAWRSVTLDC A
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