| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3203 |
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| Symbol | |
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| ID | 6162328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3546713 |
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| End bp | 3548206 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665977 |
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| Product | L-arabinose isomerase |
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| Protein accession | YP_001792226 |
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| Protein GI | 171059877 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2160] L-arabinose isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT ATCCGCAACT CGAACTCTGG TTTGTCGTCG GCAGCCAGCA CCTCTACGGC
CCCAAGACCC TGCGCGCCGT GGCCGAGAAC GCCCAGCGCA TCGTCGACGG ACTGAACGCC
GAAGGCGGCC TGCCCGCCAA GCTGGTGCTC AAGCCGACGG TGACCGAATC CGAAGGCATC
CTGGCGCTGT GCCGCGAGGC CAACAACGCG CCGCAGTGCG CCGGCCTGGT CACGTGGATG
CACACCTTCT CGCCCGCGCG CATGTGGATC GCCGGCCTGA CCGCGCTGCA GAAGCCGTTC
ATGCAGCTGC ACACGCAGGC CAACATCGAG GTGCCGTGGG CCACGATGGA CATGGACTTC
ATGAACCTGA CGCAGACCGC GCACGGCGGG CGCGAATACG GCTTCATCGC CGCGCGCCTG
CGCAAGCCGC ACGAGGTGGT GGTCGGCCAT TGGCAGGACC CGCGCGTGCA GGCACAACTC
GGCGCCTGGA TGCGCGTGGC CGCGGCGGTG CACGACAGCC GCTCGCTCAA GGTGGCGCGC
TTCGGCGACA ACATGCGCGA AGTGGCCGTG ACCGAAGGCG ACAAGGTCGA GGCGCAGATC
CGCTTCGGCT ACGCCGTCAA CGGCCACTCG CTGGGCGACC TGGCCGCGGC GATCGAGGCC
GTCACGCCCG CGCAGACGCA AGACAAGCTC GCCCAGTACG AAGCCGACTA CGAGCTGACC
GCCGCAGTGC GCGCCGGTGG CGCCAAGCGC GGCCAGCTGC TCGACGCGGC GCGCATCGAG
ATCGGCCTGC AAGGTTTCCT GGATCGCGGC GGCTTCAAGG CCTTCACGAC CAATTTCGAG
AACCTGCACG GCATCCCGCA ACTGCCCGGC CTGGCGGTGC AGCGCCTGAT GCAGCAGGGC
TACGGCTTCG GTGCCGAAGG CGACTGGAAG ACCTCGGCGC TGCTGCGCGC GATCAAGGTG
ATGGGCAACG GCAACGGCGG CGGGGCCTCC TTCATGGAGG ACTACACCTA CGACTTCACC
GCGGGCCAGG AGCTGGTGAT CGGCGCGCAC ATGCTCGAAG TCTGCCCCTC GATCGCCGCC
GAGGCCAAGC CGCTGCTCGA CGTGCAGCCG CTGTCGATCG GCAAGAAGGA CGACCCGGCG
CGCCTGATCT TCAGCGCCAA GCCCGGCCGC GCCATCCACA GCACGCTGCT GGACATGGGC
AACCGCTTCC GCCTGATCTC ACACGAGGTC GACGTGATCA CGCCGCCGCA CGATCTGCCG
CAACTGCCGG TGGCACGCGC GGTCTACCAC CCGCTGCCCG ATCTGGCGCG TGGCACCGCG
GCGTGGATCC ATGCCGGCGG CGCGCACCAC ACGGTGTTCA GCCAGGGCGT GTCGATCCAT
CAATTGCAGA CGTTCGCGGA GATGTTCGAG ATCGAGTTCG TGCACATCGG CGAGCACACC
GACATCGGGC GGCTCAAGCA GGAGTTGCGT TGGGGTGATG CGACCTGGCG TTGA
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| Protein sequence | MHAYPQLELW FVVGSQHLYG PKTLRAVAEN AQRIVDGLNA EGGLPAKLVL KPTVTESEGI
LALCREANNA PQCAGLVTWM HTFSPARMWI AGLTALQKPF MQLHTQANIE VPWATMDMDF
MNLTQTAHGG REYGFIAARL RKPHEVVVGH WQDPRVQAQL GAWMRVAAAV HDSRSLKVAR
FGDNMREVAV TEGDKVEAQI RFGYAVNGHS LGDLAAAIEA VTPAQTQDKL AQYEADYELT
AAVRAGGAKR GQLLDAARIE IGLQGFLDRG GFKAFTTNFE NLHGIPQLPG LAVQRLMQQG
YGFGAEGDWK TSALLRAIKV MGNGNGGGAS FMEDYTYDFT AGQELVIGAH MLEVCPSIAA
EAKPLLDVQP LSIGKKDDPA RLIFSAKPGR AIHSTLLDMG NRFRLISHEV DVITPPHDLP
QLPVARAVYH PLPDLARGTA AWIHAGGAHH TVFSQGVSIH QLQTFAEMFE IEFVHIGEHT
DIGRLKQELR WGDATWR
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