| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3198 |
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| Symbol | |
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| ID | 6162450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3539683 |
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| End bp | 3540927 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665972 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001792221 |
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| Protein GI | 171059872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.126152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACA ACCTCGCCGC CCATGCTGTG GCCCCCGTGG CCACGCCGCC GGCCGATCAT
GCCGAACCCG GCGCCGCCGG CTCGAAGTCG GCGCTCGACT TCATCAAGAG CAACTTCCGC
GAGTACGGCA TGCTGCTGTC GCTGGTGGCG ATCATGGCCT TCTTCCAGGT CATGACCGAC
GGCACGCTGA TGCAGCCGCT CAACCTCACC AACCTGGTGC TGCAGAACAG CTACATCGTC
ATCATGGCGC TGGGCATGCT GCTGGTGATC GTGGCTGGCC ACATCGACCT GTCGGTGGGA
TCGGTGTGCG GTTTCATCGG CGCGCTGGCG GCGGTGCTGA TGGTCAATCA CGAGTGGCAC
TACCTGAGCG CCACGCTGGT CTGCCTGGTG GTGGGCGGGC TGATCGGTGC GGCGCAGGGC
TACTTCGTGG CGTTCTTTCG CATCCCGTCG TTCATCGTCA CGCTGGCGGG CATGCTGGTG
TTCAAGGGGC TGGCGCTGGC GCTGCTCAAC GGCCAGTCGG TCGGGCCGTT CCCCGAGACC
TTCCAGGCGC TCAGCTCGGG CTTCATCCCC GACCTGTTCA GTACCGAGTC GCTGCGGCTG
ACCTCGCTGC TGATCGGCGC GGCGGTGGCC GGTGCGCTGG CGCTGGCCAG CCTGCGCTCG
CGCGGCAACC AGATCAAGCA CGGCATCGAG GCCGAGCCGG CGGGTTTCTT CTTCGCCAAG
ATCGGCGTGT TCGCGGCCAT GCTGATCTAT TTCAGCTACA TGCTGGCCTC GTACAAGGGC
CTGCCCAACG TGCTGATCGT GATGGCGCTG CTGATCGGTC TGTTCGACTT CGTCACCAGC
CGCACCACCA TCGGCCGGCG CGTCTACGCG CTCGGTGGCA ACGAGAAGGC AGCCAAGCTC
TCGGGCATCA AGACCGAGCG GCTGAGCTTC TACACCTTCG TCAACATGGG CGTGCTGGCC
GCGCTGGCCG GCCTGGTGTT CGCGGCGCGC CTGAACACCG CCACGCCCAA GGCGGGGCTG
GGTTTCGAGC TCGACGTGAT CGCGGCCTGT TTCATCGGCG GCGCCTCGGC CTCGGGCGGC
GTGGGCAAGG TGATGGGCGC GGTGATCGGC GCCTTCATCA TGGGCGTGAT GAACAACGGC
ATGTCGATCC TGGGCATCGG CATCGACTAC CAGCAGGTCA TCAAGGGCCT GGTGCTGCTG
GCGGCGGTGT TCGTCGACGT CTACAACAAG AACAAGTCGG CCTGA
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| Protein sequence | MDNNLAAHAV APVATPPADH AEPGAAGSKS ALDFIKSNFR EYGMLLSLVA IMAFFQVMTD
GTLMQPLNLT NLVLQNSYIV IMALGMLLVI VAGHIDLSVG SVCGFIGALA AVLMVNHEWH
YLSATLVCLV VGGLIGAAQG YFVAFFRIPS FIVTLAGMLV FKGLALALLN GQSVGPFPET
FQALSSGFIP DLFSTESLRL TSLLIGAAVA GALALASLRS RGNQIKHGIE AEPAGFFFAK
IGVFAAMLIY FSYMLASYKG LPNVLIVMAL LIGLFDFVTS RTTIGRRVYA LGGNEKAAKL
SGIKTERLSF YTFVNMGVLA ALAGLVFAAR LNTATPKAGL GFELDVIAAC FIGGASASGG
VGKVMGAVIG AFIMGVMNNG MSILGIGIDY QQVIKGLVLL AAVFVDVYNK NKSA
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