| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3197 |
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| Symbol | |
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| ID | 6162449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3538677 |
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| End bp | 3539654 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665971 |
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| Product | DNA-binding transcriptional regulator AraC |
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| Protein accession | YP_001792220 |
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| Protein GI | 171059871 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0504834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTT TGCGTCCCAG CCACGATGCC GCGCAGCAGC TCAACCCGCT GCTGCCGGGT
TATTCGTTCA ACCTCTACCT GGTGGCGGGC CTGACGCCGA TCGTGCAGGG CGGCGCGCTC
GACTTCTTCA TCGACCGCCC CGGCGGCATG AAGGGCTGGA TCATCAACCT GACCGTGCAA
GGCCGCGGCA AGGTGGTCGA CGGCGACCGG GCCTTCGAGT GCGAGCCGGG CGACCTGCTG
CTGTTTCCGC CCGGTGTGGC GCACGACTAC GGCCGCGCGC CTCACAGCCC GGAGTGGTTC
CATCGCTGGG TCTATTTCCG TCCGCGAGGT TTCTGGGCCA ACTGGCTGAC CTGGCCGGGG
CAGGGCGATG GCGCAGGCGC AGAGGCCGGT GCGGGAACCG GCACCGGCGT GGGTCGGCTG
CGCTTGGCCG ATCCGGCGGT GCGCAAGGAG ATCGAGGACC TGTTCGTGCA GATCGACGCC
ACCCACCGCG GCGGGCGGCG CACCTCCGAG GAGCTGGCGA TCAACCTGCT CGAGCGCCTG
CTGATCCGCT GCCACGAAGA GGCGCCGGGT TATGAATCCC GGTCGCTCGA TGCGCGGGTG
CAGTCGGCCT GCCAGTTCAT CGCCAACAAC CTGGCGCACG AGCTGAGCCT GGAGGAGATC
GCGCGCCACG TCTGCCTGTC GCCGTCGCGG CTGGCGCACC TGTTCCGTGA GCAGATGGGC
GTGAGCATCG TGCGCTGGCG CGAGGACCAG CGCATCATCC TGGCCAAGCA CATGCTGCTG
AGCACCGGCA CGCCGATCTC CAGCATCGGC GCGCGGGTCG GCTACGACGA CCAGCTGTAT
TTCTCGCGGG TGTTCCGCAA GCGCGTGGGC GTGAGCCCGA GCGAGTTCCG GCGCAGCAGC
GAGGAATCGC ATGACCCGTG GGGCGAGGCG GCGGCCGAGG CGCCGGACAC CCGCTCGCCG
CTGGCGCAGG CGGGCTGA
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| Protein sequence | MPSLRPSHDA AQQLNPLLPG YSFNLYLVAG LTPIVQGGAL DFFIDRPGGM KGWIINLTVQ
GRGKVVDGDR AFECEPGDLL LFPPGVAHDY GRAPHSPEWF HRWVYFRPRG FWANWLTWPG
QGDGAGAEAG AGTGTGVGRL RLADPAVRKE IEDLFVQIDA THRGGRRTSE ELAINLLERL
LIRCHEEAPG YESRSLDARV QSACQFIANN LAHELSLEEI ARHVCLSPSR LAHLFREQMG
VSIVRWREDQ RIILAKHMLL STGTPISSIG ARVGYDDQLY FSRVFRKRVG VSPSEFRRSS
EESHDPWGEA AAEAPDTRSP LAQAG
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