| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3184 |
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| Symbol | |
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| ID | 6162967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3519450 |
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| End bp | 3520481 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665958 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001792207 |
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| Protein GI | 171059858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000598949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAGCA CCACCCCCTC GAAGACCCCA GCGCCGACCT CGACTGCCGC CAAGCCCGCC
ACCAAGCCGG CCGCGAAGGC GGCCAAGACG GCCAAGGCGG TGACGGCCAC TGCGGCGGCG
GTCGTCGTCA AGCCGGCGGC CAAGGTGACG CGCAAGCCGG TCGGGCTGTC GCTGCACCTG
GGCCTGAACG CGGTCAGCCC GCAGCACTAC GGCGGCTGGA CCGGCGACCT GGCGGCCTGC
GAGTTCGATG CCAACGACAT GGCCGCGCTG GCTGCCGCGC GCGGCATGAA GCCGACCGTG
CTGCTGACCA AGGCGGCCAC CCGTGCCAAG GTGCTGGCGG CGCTGCGCAA GGCCTCGGGC
ACGCTCAAGG CGGGCGACTA TTTCCTGCTG AGCTTCTCGG GCCACGGCGG CCAGGTCGAT
GACGTGACCG GCGAGGAGGA CGACAAGCTC GACGAGACCT GGTGCCTGTT CGACAGCCAG
CTGATCGACG ACGAGCTGTA CCTCGAACTG AGCCGCTTCG CTGCCGGCGT GCGGGTGCTG
GTGCTGTCGG ACAGCTGCCA CAGCGGCACC GTGACACGCG CCGCGCCTCC CGGCGTGGGC
GCCGTCGGCC CGCGTCCGCG CATGATGCCG CCGGCCGTGG CACGCCGCAC CTATCAGGCG
CACCAGGCGT TCTACGACAA GCTGCAGAAG GACATCGCCC AGTCGGCCGG CAAGGCCGCG
GTGGCCGACC CCGACGCGGC GCTCGCCTCG CTGGGCACCG CCAGCGTGCG CCTGACCGAG
ATCGTCAGCC GGTTCAATGC CGCGGTGGTG CTGATCTCGG GCTGCCAGGA CAACCAGACC
TCGATGGACG GCGAGCAGAA CGGCGCCTTC ACCGAGCAGC TGCTGCGGGT CTGGCGCGAG
GGCCGCTTTG CCGGCAACCA CCGCCAGTTC CACGCCCGCA TCCGCGCCGG CCTGCCGGCC
ACGCAGTCGC CCAACCTGTT CGTGCTGGGC AATGCGGGCG TGATGCTGGC GCAGACGCCG
TTCACGGTCT GA
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| Protein sequence | MPSTTPSKTP APTSTAAKPA TKPAAKAAKT AKAVTATAAA VVVKPAAKVT RKPVGLSLHL
GLNAVSPQHY GGWTGDLAAC EFDANDMAAL AAARGMKPTV LLTKAATRAK VLAALRKASG
TLKAGDYFLL SFSGHGGQVD DVTGEEDDKL DETWCLFDSQ LIDDELYLEL SRFAAGVRVL
VLSDSCHSGT VTRAAPPGVG AVGPRPRMMP PAVARRTYQA HQAFYDKLQK DIAQSAGKAA
VADPDAALAS LGTASVRLTE IVSRFNAAVV LISGCQDNQT SMDGEQNGAF TEQLLRVWRE
GRFAGNHRQF HARIRAGLPA TQSPNLFVLG NAGVMLAQTP FTV
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