| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3163 |
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| Symbol | |
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| ID | 6161760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3495456 |
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| End bp | 3496745 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665939 |
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| Product | integrase family protein |
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| Protein accession | YP_001792188 |
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| Protein GI | 171059839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0193699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACAG CACAGATCAA GAGCGACACC GGCTTGCGGG CCGAACTCAA GGCGATCGTG
GACGGCAAGA AGCCGGCGCG GCGCATCGGC GACGGCGGCG GGCTGTACCT GCTGCCGCTG
GTCAAGGGCG GCGCCCACGG CTGGCGGCTC GACTACACCT TCAACGGCAA GCGCAAGACC
CTGAGCTTGG GCACCTACCC CGACACCGGC CTGTCTCTGG CCCGCAAGAA AGCCGCCGAA
GCGCGCACGC TGGTGGCCGA AGGCACCGAC CCGAGCGAGC ACCGCAAGGG CGTCAAGGAA
GAGCGCGAGC GCCAGCACCT GGCCGGCCAG GAAGCCGCGC AACGGGCCGC GGCGGGGCTG
GCCGAACCCG GCAGCCTCGA AGCCGTGGCC GCCGACTGGC TGCAGCACCG CGCAGGCGCC
TGGACCGAGG GCACGCGGCA CAACATCGCC GGATCGCTGA AGCGCTACGT GTTCCCCACG
CTGGGCCGCC GGCCGGTCGG CGAGATCGCG CCCGGGGAGA TCCGCACCTG CGTGCAGCGC
ATCGAGGCCA GCGGCGCAGC CGAGACCGCC GGGCGGGTGT TCCAGCGGCT GCGGGCGCTG
TACCGCTACG CCGTGGCGCA CGAACTGGTA GCGGCTGACC CGACGTATCC GCTCAAGCCG
TCGGAGATCT TCCGGCCACG CGACACCAAG CACCGGCCGG CGATGTCAGC GCAAGAGGCG
CCGGCCTTCC TGCGCAAGCT GGCCGACTAC GGCGGCGACC CGACGGTGCG CAACGCCCTG
TTGTTGCTGG TGTTGACGGC CGTTCGGCCT GGCGAGCTGC GGGCCGCAGA GTGGACCGAG
ATCGACGAAG CCGCCGCGCT GTGGCGCATC CCGGCGGCGC ACATGAAGAT GAAGGCCGAA
CACCTGGTGC CGCTGTCGGT GCAGGCCCTG GCCGTGCTGG AAGAGATGCG GGCGCTGACC
GGCACGCAGG CGCTGATCTT CCCGAGCCCG TTCTACCCGG GCCGCCCGTT CAGCGAGAAC
ACCATGAACA GCGCGCTGGC CCGCATGGGC TACAAGGGCG AGGCCACCGC CCACGGCATG
CGCACCCTGT TCAGCACCAG CGCCAACGAG GCCGGCCACC GAGGTGACGT GATCGAACGC
CAGCTGGCCC ACGAGGAACG CGACGACGTG CGCGGCGCCT ACAACCGGGC CGAATACATG
GCAGAGCGTC GCCGGCTGAT GACCTGGTGG GGCGAGCGTG TGGACAGCAT GCGGCGCGGT
GCCGAGGTCA TCCCCTTCAA GGCCGCCTGA
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| Protein sequence | MATAQIKSDT GLRAELKAIV DGKKPARRIG DGGGLYLLPL VKGGAHGWRL DYTFNGKRKT
LSLGTYPDTG LSLARKKAAE ARTLVAEGTD PSEHRKGVKE ERERQHLAGQ EAAQRAAAGL
AEPGSLEAVA ADWLQHRAGA WTEGTRHNIA GSLKRYVFPT LGRRPVGEIA PGEIRTCVQR
IEASGAAETA GRVFQRLRAL YRYAVAHELV AADPTYPLKP SEIFRPRDTK HRPAMSAQEA
PAFLRKLADY GGDPTVRNAL LLLVLTAVRP GELRAAEWTE IDEAAALWRI PAAHMKMKAE
HLVPLSVQAL AVLEEMRALT GTQALIFPSP FYPGRPFSEN TMNSALARMG YKGEATAHGM
RTLFSTSANE AGHRGDVIER QLAHEERDDV RGAYNRAEYM AERRRLMTWW GERVDSMRRG
AEVIPFKAA
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