| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3160 |
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| Symbol | |
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| ID | 6162737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3487682 |
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| End bp | 3488863 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665935 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792185 |
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| Protein GI | 171059836 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG ACTTCTTCTA CACCCTGCGC GCGGCCCGGC TGAAGGTCAC GGTGACCGAG
TTCCTGAGCC TGCTCGAAGC CCTGCAGGCC GGCGTGATCG ACGATGACGG CGGCCCCACG
GTCGACAAGT TCTATCACCT GGCCCGCCTC ACGCTGGTCA AGGACGAGGC CCATTTCGAC
CGCTTCGACC AGGCCTTCGG CGCCTACTTC AAGGGCGTGG AGATGCTGAC CGACTTCGCC
CGCGAGGTGC CGCTCGACTG GCTGCGCCAG ACGCTCGAGC GCGAACTCAG CGCCGAAGAA
CGCGCGCGCA TCAAGACGAT GGGCTGGGAC GATCTGATGG AGACGCTCAA GAAGCGCCTC
GACGAGCAGA AGGAGCGCCA CGAAGGCGGA TCCAAGTGGA TCGGCACCGG CGGCACCAGT
CCGTTCGGCC ACGGCGGCAC CAACCCGCAG GGCGTGCGCA TCGGCGGCGC CGGCAAGAAC
CGCAGCGCGG TCAAGGTCTG GGAGCAGCGC AGCTTTCGCG ACTACGACGA CACGCTCGAG
CTCGGCACCC GCAACATCAA GGTCGCGCTG CGCCGCCTGC GGCGCTTCGC GCGCGAGGGC
GCGGCCGAGG AGCTGGATCT GGAAGACACC ATCCACAGCA CCGCGGCCAA CGCCGGCATG
CTCGACATCA AGCTGGTGCC CGAGCGCCAC AACAAGATCA AGGTGCTGCT GCTGATGGAC
GTGGGCGGCA CGATGGACGA ACACATCCCG CGCGTCGAGG AACTGTTCTC GGCCGCCAAG
AGCGAGTTCA AGCACCTCGA GTTCTATTAC TTCCACAACT GCGTCTACGA CCACCTGTGG
CGCAACAACC ACCGCCGCTA CGCCGAGAAG TTCGACACCT GGGACGTGAT CCGCAAGTAC
AACCGCGACT ACAAGCTGAT CTTCATCGGC GACGCCACGA TGAGCCCCTA CGAGATCGTG
CAGGTGGGCG GCAGCGTCGA ATACAACAAC AAGGAAACCG GCGCGCAATG GCTGCAGCGA
CTGACCCACG CCTTCCCGAA ATTCGCCTGG ATCAACCCCG AGCCGCAGGG CGTGTGGCAG
TACCGGCAGA GCATCGCCAT CGTCGAGCAG CTGATGAGCG CACGCATGTT CCCGCTCACG
CTGTCCGGGC TCGAACAGGC GATGCGACTG CTGTCGAAGT GA
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| Protein sequence | MLIDFFYTLR AARLKVTVTE FLSLLEALQA GVIDDDGGPT VDKFYHLARL TLVKDEAHFD
RFDQAFGAYF KGVEMLTDFA REVPLDWLRQ TLERELSAEE RARIKTMGWD DLMETLKKRL
DEQKERHEGG SKWIGTGGTS PFGHGGTNPQ GVRIGGAGKN RSAVKVWEQR SFRDYDDTLE
LGTRNIKVAL RRLRRFAREG AAEELDLEDT IHSTAANAGM LDIKLVPERH NKIKVLLLMD
VGGTMDEHIP RVEELFSAAK SEFKHLEFYY FHNCVYDHLW RNNHRRYAEK FDTWDVIRKY
NRDYKLIFIG DATMSPYEIV QVGGSVEYNN KETGAQWLQR LTHAFPKFAW INPEPQGVWQ
YRQSIAIVEQ LMSARMFPLT LSGLEQAMRL LSK
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