| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3084 |
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| Symbol | |
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| ID | 6163472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3413785 |
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| End bp | 3414924 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665859 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001792109 |
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| Protein GI | 171059760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CCCAGGCTCA TCCGGTTCCA CACGTCGTTC ACGTCATCGA TGAACTGCCG
CCCGACGGCG CGCAGCGCCT GATCGTCGAG GTGCTGCAGA ACGCCAGCCG GCGCTTCCGC
TATTCGGTGC TGTGCATGGT CAAGGGCGGC GTGCTCGAAG CCGAGCTCGC GAGCATCGGC
GTGCCGGTGC ACGTGCTCGG GCGCAAGCCC GGCATCGATC TCGGCACGGT GCCGGCGCTG
CTCGGCTGGT TCCGCGAGCA TCGGCCCGAT GTCGTGCACA CCCATCTCTA CAACGCCGAC
AGCTACGCGC GCCTGGCCGC GTGGCTGGCG GGCGTGCCGA CGCTCTTCAC CACCCGCCAC
AGCACGGTGC CGTGGCCGAG CGCGTCGCGG CGCTGGATTG CCCGCAGCCT GAGCCGTGTG
ACAGATGCCA CGATCGCCTG CGGTGCCGAA GTCGAACGCA TGCTGGTGAC CCAGGAAGGA
ATTGCGCCCA ATCGTGTCAA GACGGTTGCA AATGGCATCA ATTTGCGGCG ATTCGAAAGT
GCCGACGGAC GGCGTCTGCG CGCTGAACTG GGCGTTCTGC CGGGCCAGGT GCTGATCGGC
GTGATCGGGC GCCTGCATCC GCTCAAAGGC CATGCCGATC TGATCGTGGC ACTGGCTCAG
CTCTATCGCG AGGGCGTCGA TTTCCAGTGT GTCTTCGTCG GTGGCGGCGA CCTGCACGAC
GCGTTGCAGC AGCAGGTCGA CGAGGCCGGC CTGAACGGTG TCGTACGCCT GCTGGGGCAG
CGCAGCGACG TCGCCGACGT GCTGGCCGCG ATCGACATCT TTGCCATGCC GTCGCGCCGC
GAGGGGCTGC CGATGGCCTT GCTCGAATCG ATGGCGATGG CGCGCGCGGT GCTGGCCACG
GCGGTCGGTT CGATCCCTGA AGTCATCACC GACGGCGAGA ACGGCATGCT GGTCGAACCG
AGCAATCCGT CACGACTGGC GGCGGCCCTG TCACGCCTTC TGCGTGATGC ACCCTTGCGC
GAAAAGATCG GTCGGGCGGC CCGCGCCACG GTCGAGGCCG GCTACAGCTC GACACAGACC
GCGCGCGCTT ATGAGTCACT CTACGAACAA GCGTTGAGCG CACGATTGCC GACGTCCTGA
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| Protein sequence | MSDPQAHPVP HVVHVIDELP PDGAQRLIVE VLQNASRRFR YSVLCMVKGG VLEAELASIG
VPVHVLGRKP GIDLGTVPAL LGWFREHRPD VVHTHLYNAD SYARLAAWLA GVPTLFTTRH
STVPWPSASR RWIARSLSRV TDATIACGAE VERMLVTQEG IAPNRVKTVA NGINLRRFES
ADGRRLRAEL GVLPGQVLIG VIGRLHPLKG HADLIVALAQ LYREGVDFQC VFVGGGDLHD
ALQQQVDEAG LNGVVRLLGQ RSDVADVLAA IDIFAMPSRR EGLPMALLES MAMARAVLAT
AVGSIPEVIT DGENGMLVEP SNPSRLAAAL SRLLRDAPLR EKIGRAARAT VEAGYSSTQT
ARAYESLYEQ ALSARLPTS
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