| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3080 |
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| Symbol | |
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| ID | 6160472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3410081 |
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| End bp | 3411199 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665855 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001792105 |
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| Protein GI | 171059756 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TCCTGGTGAT CGACGGTTTT TATCCCTGGC CCGGTGGCAC CGAGAGCCAG
GTGGCCTTGC TGGCGCGGCT GTTCAAGCGC CGCGGCCACG AGGTGCGCAT CATCGCGCCA
CGCCTGGACC CGGCCAAGCC GCTCGAGGAG ATGGTCGACG GCACCCGTGT CACGCGCATC
GACTACCCCA AGATCAAGGG CTTCGGTGCG GTGTTCCTGA TCCTGAAGTT CATGCTGTTC
CTGCTGCGCG AGCGCAGCCA CTACGACGCC CTGCACATCC ACATGGCCAA GAACCTGGCC
GCCGCTGCCG GCGCCGTGCG GCCCTGGTTG CCGGGGCCGG TGCTGGTCAA GGTGTCGGGT
GCCTGGGAGT TCGAGGGCGG CGTGCTCGAC GAGCGCATGA AGAAGCATCC GGTCTATTCG
ACGCTGCGCC GTCTGATGCA GCGCAACGAT GCCTTCCAGG CCATCAGCGT CGAGACCGAA
CGCCGTCTGC TGGCCTCGGG CATGCCGGCG AGCAAGGTGC TGGCGATTCC GAACGCGGTC
GATCTGTCGC TCTACGGCTC GCGTGAATTC GACCCGGCGC GCAAGGTTCT GCGCGTGGTC
TACACCGGCC GGCTGGCGCC GGTCAAAGGC GTCGACGTGC TGCTGCGGGC CTGGAACGAG
CTGCCGAACC GCGATCAGCT CGAGCTCAAC ATCGTCGGCG ACGGCCCGCA ACGCGTCGAG
ATCGAGGCCT ATGTGGCGCA GCACCAGCTC GGCGCCGGCG TGCGTTTTTC GGGCTGGACC
GACGACGTGC GCAGTGCGCT GCGTGATGCC GATCTGTACG TGCAGCCCTC GCTCAACGAA
GGCCTGCCCA ACTCGGTGCT GGAGGCGATG GCCGCCAGCC TGCCGATCGT GGCGACCCGC
GTGTCGGGCA ATGAAGATCT GGTGGTCAGC GGCGTCAACG GCTACCTGGC CGAAGCGGGC
GACAGCGCCT CGCTGGCTGC TGCGCTGACA CGCGCACTGG CCGACCCCGC CGCCATGCAC
CGCATGGGCC AGGCCTCGCG CCGCTTCATC GAAGACCGCT ACGGCTCCGA GCGCGTGCTC
GGCCAGCTCG AAGCGGTGTA CGCCGGCTCG GCCGCTTGA
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| Protein sequence | MRLFLVIDGF YPWPGGTESQ VALLARLFKR RGHEVRIIAP RLDPAKPLEE MVDGTRVTRI
DYPKIKGFGA VFLILKFMLF LLRERSHYDA LHIHMAKNLA AAAGAVRPWL PGPVLVKVSG
AWEFEGGVLD ERMKKHPVYS TLRRLMQRND AFQAISVETE RRLLASGMPA SKVLAIPNAV
DLSLYGSREF DPARKVLRVV YTGRLAPVKG VDVLLRAWNE LPNRDQLELN IVGDGPQRVE
IEAYVAQHQL GAGVRFSGWT DDVRSALRDA DLYVQPSLNE GLPNSVLEAM AASLPIVATR
VSGNEDLVVS GVNGYLAEAG DSASLAAALT RALADPAAMH RMGQASRRFI EDRYGSERVL
GQLEAVYAGS AA
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