| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3075 |
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| Symbol | |
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| ID | 6162638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3404130 |
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| End bp | 3405254 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641665850 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001792100 |
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| Protein GI | 171059751 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCC TTTTCTGGAT TGCCCTGCTG TTTGTCGCCT ACACCTATGC GGGTTATCCG
CTTGCGGTGT GGCTGCTGGC TCGGGCACGC GGAGCCGAGC CGATCGCCAA TGATGACCCC
ACCGAATGGC CGGCCGTGAC GGTGGTGATC GCCGTTCACA ACGAGCAGGC GAGGGTTCTG
AAGAAGATCG AGAACCTGCG CAACCTCGAC TATCCGGCCG ATCGCCTGCA CTGGATCTTT
GTCTCGGACG GATCCACCGA CGCCACCAAT GACCTGCTGC GGGCACAACC GCAGGGGCGC
CTGATCGCCT ATCCGGATCG ACAAGGCAAA CCGCATGCCC TGAACACGGC CCTGCGTGAA
GTGACGACGC CGATCGTCGT GTTTGCCGAC GTGCGCCAGC ACATCGAACG ATCGGCTGTT
CGCAAGCTCG TGACGCGCCT GCTCCAGCCG GGCATCGGCG CCGTCAGCGG CGAACTCACG
CATGTCGAGC CAGGCACGCA ATCGGCAGCC AGCATCGGCC TCTACTGGCG CTATGAAAAA
TGGATCCGCA AATCGGAGTC TCGACTGGCC TCCACGGTCG GGGCCACGGG TGCGCTGTAT
GCGATGCGAA CGGCCGACTA CACGCCGCTT GCCTCGGACA CCATCCTCGA CGACTTCGAA
CAACCGATGC TGGTCGCGCG CAGCGGCAAG CGGGTGGTGT TCGAGCCTGG CGCCGTGATC
TTCGATGAAC TGCAGTCGGA CATGGCCGGC GAGCGCAAGC GCAAGATCAG GACCCTGACC
GGCAACTTCC AGTCCTTCGC ACGCCACGGC TGGATGTTCG TGCCGTGGCA GAACCCGCTG
TGGCTGCAGT TCCTGTCGCA CAAGGTGTTT CGCCTGCTGG TGCCCTATGC GCTGATGGTG
ATGCTGGTCA CCTCCGCCTT TCTACCTACT GCGTGGATGG CGCTGTTCCT GCCGGGCCAG
TTGCTGTTCT ACGCCCTGGC GGCACTCGGC CAGCGCACGG CCGCGTTCAA GCGCATGCGG
CTCGCCAGTT TTGCGGGCGT CTTCGTCGAG ATGAACTGGG CCGCCGTGAT CGCGCTGCGC
AACTGGCTGG CAGGCGGCGT CAATGCACGA TGGGAAAAGA CATGA
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| Protein sequence | MQTLFWIALL FVAYTYAGYP LAVWLLARAR GAEPIANDDP TEWPAVTVVI AVHNEQARVL
KKIENLRNLD YPADRLHWIF VSDGSTDATN DLLRAQPQGR LIAYPDRQGK PHALNTALRE
VTTPIVVFAD VRQHIERSAV RKLVTRLLQP GIGAVSGELT HVEPGTQSAA SIGLYWRYEK
WIRKSESRLA STVGATGALY AMRTADYTPL ASDTILDDFE QPMLVARSGK RVVFEPGAVI
FDELQSDMAG ERKRKIRTLT GNFQSFARHG WMFVPWQNPL WLQFLSHKVF RLLVPYALMV
MLVTSAFLPT AWMALFLPGQ LLFYALAALG QRTAAFKRMR LASFAGVFVE MNWAAVIALR
NWLAGGVNAR WEKT
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