Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3064 |
Symbol | |
ID | 6162719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3390383 |
End bp | 3390976 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641665839 |
Product | hypothetical protein |
Protein accession | YP_001792089 |
Protein GI | 171059740 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.686799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAC CCCTCAGCCC GAAACCGGGC GCGTTGGCCA ACCTGATCTT CGCCAGCCGC TGGTTGCAAT TGCCGCTCTA CCTGGGACTG ATCCTGGCGC AGGGTGTCTA CGTCTTCCAC TTCTGGGTCG AACTGGTGCA CCTGATCGAG GCGGCGTTCG GCAACCAGGC CGCGCTCGCC CAGCTGGTGG GCAGCATCGG CTACAAGAGC GACATCCAGG TCTCGCAGCT CAACGAGACC ATCATCATGC TGGTGGTGCT AGCACTGATC GACGTGGTGA TGATCAGCAA CCTGCTGATC ATGGTGATCA TCGGCGGCTA CGAGACCTTC GTGTCGCGCC TGGGCCTCGA GGAGCACCCG GACCAGCCCG AGTGGCTGAG CCACGTCAAC GCCTCGGTGC TCAAGGTCAA GCTGGCCACC GCCATCATCG GCATCAGCTC GATCCACCTG CTCAAGACCT TCATCAACGC CGAGAACTAC TCCGAGAAGG TGCTGATGTG GCAGACCGTG ATCCACATCG CCTTCCTGTT CTCGGCGCTG TCGATCGCCT ACGCCGACCG CCTGATGTCG GCAGGCAAGC CTGACGACCA CTGA
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Protein sequence | MKEPLSPKPG ALANLIFASR WLQLPLYLGL ILAQGVYVFH FWVELVHLIE AAFGNQAALA QLVGSIGYKS DIQVSQLNET IIMLVVLALI DVVMISNLLI MVIIGGYETF VSRLGLEEHP DQPEWLSHVN ASVLKVKLAT AIIGISSIHL LKTFINAENY SEKVLMWQTV IHIAFLFSAL SIAYADRLMS AGKPDDH
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