Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3027 |
Symbol | |
ID | 6160849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3346343 |
End bp | 3346759 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641665802 |
Product | hypothetical protein |
Protein accession | YP_001792052 |
Protein GI | 171059703 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA ACCTGAGCGA CGTGCAGGCC GAACTCTGCG GCGTGTTCGA CGCCTACGAG GCCGCCCTCG TCAGCAACGA CGTCGCCACC CTCGACGCCC TGTTCTGGGC CAGCGAACAC ACCGTGCGCT ACGGCACCGG CGAGAACCTG ATCGGCATCG AGGCGATCCG CGCCTTCCGC AACGCGCGCT CGTCGCAAGG CCTGGCTCGC GTGCTGAGCC ACACCGTCAT CACCACCTTC GGCCGCGACT TCGGCACCGC CATGACCGAG TTCGTGCGCC CCTCCTACCG CCAGGACGGC CGGCTGCTGC GCGTGGGCCG GCAGAGCCAG ACGTGGGTGC GCACGGCAGA GCCCGGCCAC GGCGGCTGGC GCGTGGTGGC CGCGCACGTC AGCCTGCTCG ACCTGCCTGC CGACTGA
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Protein sequence | MDINLSDVQA ELCGVFDAYE AALVSNDVAT LDALFWASEH TVRYGTGENL IGIEAIRAFR NARSSQGLAR VLSHTVITTF GRDFGTAMTE FVRPSYRQDG RLLRVGRQSQ TWVRTAEPGH GGWRVVAAHV SLLDLPAD
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