Gene Lcho_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3027 
Symbol 
ID6160849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3346343 
End bp3346759 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content71% 
IMG OID641665802 
Producthypothetical protein 
Protein accessionYP_001792052 
Protein GI171059703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA ACCTGAGCGA CGTGCAGGCC GAACTCTGCG GCGTGTTCGA CGCCTACGAG 
GCCGCCCTCG TCAGCAACGA CGTCGCCACC CTCGACGCCC TGTTCTGGGC CAGCGAACAC
ACCGTGCGCT ACGGCACCGG CGAGAACCTG ATCGGCATCG AGGCGATCCG CGCCTTCCGC
AACGCGCGCT CGTCGCAAGG CCTGGCTCGC GTGCTGAGCC ACACCGTCAT CACCACCTTC
GGCCGCGACT TCGGCACCGC CATGACCGAG TTCGTGCGCC CCTCCTACCG CCAGGACGGC
CGGCTGCTGC GCGTGGGCCG GCAGAGCCAG ACGTGGGTGC GCACGGCAGA GCCCGGCCAC
GGCGGCTGGC GCGTGGTGGC CGCGCACGTC AGCCTGCTCG ACCTGCCTGC CGACTGA
 
Protein sequence
MDINLSDVQA ELCGVFDAYE AALVSNDVAT LDALFWASEH TVRYGTGENL IGIEAIRAFR 
NARSSQGLAR VLSHTVITTF GRDFGTAMTE FVRPSYRQDG RLLRVGRQSQ TWVRTAEPGH
GGWRVVAAHV SLLDLPAD