| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3015 |
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| Symbol | |
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| ID | 6161081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3330398 |
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| End bp | 3331606 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665790 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001792040 |
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| Protein GI | 171059691 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGGA CCTTCGAGAT CCTGGTGCTC AACCAGATCT CGGCCAGCGG CCTCAAGCGC
CTGCCGGCGC CGAGGTATCA CGTCGGCAAG GAGGTCACGC AACCCGACGC CGTGCTGCTG
CGTTCGGCCG ACATGCACAC GATGGCGATC CCGGCCAGCG TGCAGGCGGT CGCCCGGGCC
GGCGCCGGCA CCAACAACAT CCCCGTGCCG GCGCTCAGCG CTCGCGGCGT GCCGGTCTTC
AACGCACCGG GCGGCAACGC CAACGCGGTC AAGGAACTGG TGCTGACCGG CATGCTGCTG
GCCGCGCGCA ACGTGCCGGC GGCGCTGCAG TTCGTGGCCG GCCTCGACAC CGCGGCGGCC
GATCTCGACC AGGTCGTCGA GGACGGCAAG AAGGCCTTTG CCGGCTACGA GCTGGCCGGC
CACACGCTGG GCATCGTCGG CCTGGGCAAG GTCGGCGCGC TGGTGGCCGA CGCCGCGATC
AAGCTCGGCA TGGACGTGCT GGGCTACGAC CCCGAGATCA CGGTCGACGC CGCCTGGAGC
CTGCCCTCGC AGGTGCGCCG CGCCACCAGC GTGGCCGAGG TGCTCAAGAG CGGCCATTTC
GTGACGCTGC ACGTGCCGCT GGTCAAGGCC ACGCGCGACC TCGTCAACGC CGACAACATC
GCCCTGATGC GCCGCGGCGC GGTGCTGCTC AACTTCTCGC GCGACGGCGT GGTCAACGAG
CAGGCGGTGC TCGGCGCGCT GGCGGGCAAG CACCTGGGCC GCTACGTCTG CGATTTCCCG
AGCGCGGCGC TGGCCGGCAA CGACGGCGTG ATCGCGCTGC CGCACCTGGG CGCCTCGACC
CGCGAGGCCG AGGACAACTG CGCCGTGATG GTGGCGCAGC AGCTGCGCGA CTACCTCGAG
CACGGCAACG TCGCCAACGC GGTGAACTTC CCGTCGGTCA GCATGGCGCG CGAGTCGGCC
TGGCGGGTGG CGATCGCCAA CGCCAACGTG CCCAACATGC TGGGCCAGAT CTCGACCACG
ATGGCGCGCG CCGGGCTCAA CATCCACAAC ATGGTCAACA AGTCGAGGGG CGACGTGGCC
TACACGCTGG TCGACGTCGA CAGCCCCGTG AGCGCGCAGG TGCTGGCCGA GCTGGCGGCG
ATCGCCGGCG TGCTGGCGGT GCGCTACCTG CCGCAACCGA CCGACGGCGC GACCTCAGAT
CCGGACTGA
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| Protein sequence | MARTFEILVL NQISASGLKR LPAPRYHVGK EVTQPDAVLL RSADMHTMAI PASVQAVARA
GAGTNNIPVP ALSARGVPVF NAPGGNANAV KELVLTGMLL AARNVPAALQ FVAGLDTAAA
DLDQVVEDGK KAFAGYELAG HTLGIVGLGK VGALVADAAI KLGMDVLGYD PEITVDAAWS
LPSQVRRATS VAEVLKSGHF VTLHVPLVKA TRDLVNADNI ALMRRGAVLL NFSRDGVVNE
QAVLGALAGK HLGRYVCDFP SAALAGNDGV IALPHLGAST REAEDNCAVM VAQQLRDYLE
HGNVANAVNF PSVSMARESA WRVAIANANV PNMLGQISTT MARAGLNIHN MVNKSRGDVA
YTLVDVDSPV SAQVLAELAA IAGVLAVRYL PQPTDGATSD PD
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