Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3000 |
Symbol | |
ID | 6163913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3307049 |
End bp | 3307522 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665776 |
Product | transposition helper protein |
Protein accession | YP_001792026 |
Protein GI | 171059677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGAT ACGGACAAGC GTTCAAGGAC AAGGCGGTGG CGAGGTTGTT GCCACCTGAG AGTGCATCGC TGGAAGACGT GGCACTGGAG ACAGGAGTTT CGTCGGCCAC GTTGGAGCGC TGGCGCAGCG AAGCCCTGGG TCAGCCCGAA CGTGAGCGGG TATGGACCGC GGCGGCGAGG TTTGATGCCG TGCTGACGAC GGCGGCCATG GATGAAGCCT CCAAGAGCGC ATGGTGCCGC ACGAACGGCG TGTACCCCCA GGAACTTGAT CAGTGGCGGG CGTCGGCCAC ACAGGCGTTG GCAGCGCCCG AAGAAGCGCG GGCCAGTCCG CAGCAGACCA AACTCGACCG CAAGCGCATC CAGGAGTTGG AGCGCGAACT GCGGCGCAAG GACCGGGCCT TGGCTGAGAC GGCGGCGCTG CTGGTACTGT CAAAAAAAGT CGAGGCGATC TTCAACAGGG GCGAGGACGA ATGA
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Protein sequence | MARYGQAFKD KAVARLLPPE SASLEDVALE TGVSSATLER WRSEALGQPE RERVWTAAAR FDAVLTTAAM DEASKSAWCR TNGVYPQELD QWRASATQAL AAPEEARASP QQTKLDRKRI QELERELRRK DRALAETAAL LVLSKKVEAI FNRGEDE
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