| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2997 |
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| Symbol | |
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| ID | 6163844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3302398 |
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| End bp | 3303831 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665774 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001792024 |
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| Protein GI | 171059675 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT CTATCACCTC CGCGGCCGCG GCCGCAGATC CGGCATCGAA CGCCGCCCTT
TCCTTCAGCA GCCTGCCGCT GCCACCGGCC ACGCTGGCCA ATCTGCAGCA GCTCGGCTAC
ACCGCCATGA CCCCGATCCA GGCCGCCAGC CTGCCGCTGG CCCTGGCCGG CCACGACCTG
ATCGCGCAGG CCAAGACCGG CAGCGGCAAG ACCGCCGCCT TCGCGCTGGC GCTGCTGGCC
AACCTGAATC CGCGCCGCTT CGCGGTGCAG AGCCTGGTGC TGTGCCCGAC CCGCGAGCTG
GCCGAGCAGG TGACCCAGGA GGTGCGCCGC CTGGCCCGCG CCGAAGACCA CATCAAGGTG
CTGACGCTGG TCGGCGGCAC CACCATGCGC CCGCAGCTGG CCAGCCTGGA GCACGGCGCG
CACATCGTCA TCGGCACGCC CGGCCGCATC ATGGACCACC TCGAGCGTGG CAGCCTCGAC
CTGTCGGCGC TCAACACCCT GGTGCTCGAC GAGGCCGACC GCATGCTCGA CATGGGCTTC
TTCGACGACA TCAAGACCGT CATCCAGCAG TGCCCGAAAG AGCGCCAGAC GCTGCTGTTC
TCGGCCACCT ACCCCGAAGG CATCGCCCGC ATCAGCGCGG CCTTCATGCG CGCGCCCAAG
GAGATCAAGC TGACCGAAAA GCACGCGGCC GGCAAGATCC GCCAGATCTT CTACGAGGTG
CGCGAAGACG AACGCCTGCA CGCCGTCTCG CTGCTGCTCG ACCACTACCG CCCGGTCAGC
ACGCTGGCCT TCTGCAACAC CAAGCAGCAG TGCCGCGACC TGGTGCAGGT GCTGCGCGCG
CAGGGTTATT CGGCGCTCGA GCTGCACGGC GACCTGGAAC AGCGTGACCG CGACCAGGTG
CTGATCCAGT TCGCCAACCA GAGCTGCAGC GTGCTGGTGG CCACCGACAT CGCCGCCCGC
GGCCTCGACA TCAGCCAGCT CGGCGCGGTC ATCAACGTCG AGATCACGCC CGACATCGCC
ACCCACACGC ACCGCATCGG CCGCACCGGC CGGGCCGACG AAGAAGGCTG GGCCTTCAGC
CTGGCCAGCA TGGACGAGAT GGGCCGGGTC GGCCAGATCG AGGTGATGCA CGGCTTCACC
GCGCAATGGC AACCGCTGGC CACGCTCACC AAGACCAGCG CCGAGCCGCT GCTGCCGCCG
ATGCAGACGA TCCAGATCCT CGGCGGGCGC AAGGAAAAGA TCCGCCCCGG CGACGTGATG
GGCGCGCTGA CCAAGGACAT GGGTTTTGCC GGCGCGCAGA TCGGCAAGAT CAACGTCAAC
GAGTTCTCGA CCTACGTGGC GGTGGCGCGC GAGATCGCGC CGCAGGTCGA ACGCAAGCTG
GCCGCCGGCC GGGTCAAGGG GCGCAGCGTG AAGGTGCGGT TGATGGCGGG CTGA
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| Protein sequence | MSSSITSAAA AADPASNAAL SFSSLPLPPA TLANLQQLGY TAMTPIQAAS LPLALAGHDL
IAQAKTGSGK TAAFALALLA NLNPRRFAVQ SLVLCPTREL AEQVTQEVRR LARAEDHIKV
LTLVGGTTMR PQLASLEHGA HIVIGTPGRI MDHLERGSLD LSALNTLVLD EADRMLDMGF
FDDIKTVIQQ CPKERQTLLF SATYPEGIAR ISAAFMRAPK EIKLTEKHAA GKIRQIFYEV
REDERLHAVS LLLDHYRPVS TLAFCNTKQQ CRDLVQVLRA QGYSALELHG DLEQRDRDQV
LIQFANQSCS VLVATDIAAR GLDISQLGAV INVEITPDIA THTHRIGRTG RADEEGWAFS
LASMDEMGRV GQIEVMHGFT AQWQPLATLT KTSAEPLLPP MQTIQILGGR KEKIRPGDVM
GALTKDMGFA GAQIGKINVN EFSTYVAVAR EIAPQVERKL AAGRVKGRSV KVRLMAG
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