| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2992 |
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| Symbol | |
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| ID | 6162646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3295737 |
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| End bp | 3296816 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665769 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001792019 |
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| Protein GI | 171059670 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCC GCTACAAGAT CGCCGTCATC CCCGGCGACG GCATCGGCCG CGAAGTGATG
CCCGAGGGCC TGCGCGCGCT GCAGGCCGCG GCGCGCCGTT TCGACCTGGC CTTCGATTTC
ACGCCGATCG AATGGGCCAG CTGCGACTAC CACGCCCGCA CCGGCGAGAT GATGCCCGCC
GACTGGAAGG CGCAGCTGCA GGGCATGGAC GCGATCTATT TCGGCGCGGT CGGCTGGCCG
GCGACGGTGC CCGATCACGT CTCGCTGTGG GGCTCGCTGC TGAAGTTCCG GCGCGAGTTC
GACCAGTACA TCAACCTGCG GCCGGTGCGG CTGTTCGAGG GCGTGCCGTG CCCGCTGGCC
GGGCGCCGCG CCGGTGACAT CGACTACTGC GTTGTGCGCG AGAACACCGA GGGCGAGTAC
ACCAACCTCG GCGGCGTGAT GTTCGCCGGC ACCGAACGCG AGATCGTGAT CCAGGAGTCG
GTGTTCTCGC GCCACGGCAC CGACCGGGTG CTGAAGTACG CCTTCGAGCT GGCCCGCAGC
CGTGCCCGCA AGCACCTGAC GGTGGCGACC AAGAGCAACG GCATCGCCAT CAGCATGCCG
TGGTGGGACG GCCGCGCCGA TGCGATGGCG ATGGCCTATC CCGAGGTGAC GGTCGACAAG
CAGCACATCG ACATCCTCAG CGCACGTTTC GTGCTGCAGC CCGGCCGCTT CGACGTGGTG
GTGGCGAGCA ACCTGTTCGG CGACATCCTG AGCGACCTCG GCCCCGCCAC CACCGGCACC
ATCGGCCTGG CGCCGTCGGC CAACCTGAAC CCCGAGCGCC GCTTCCCGTC GCTGTTCGAG
CCGGTGCACG GCTCGGCGCC CGACATCTAC GGCCGCAACA TCGCCAACCC GGTGGCGATG
ATCTGGTCGG GCGCGCTGAT GCTCGACTTT CTCGGCCATC GCGACGCCCA CGACGCGATC
GTGCGCGCCA TCGAGACCGT GCTGGCGCAG GGCCCGCGCA CGCCCGACCT GGGCGGCAGC
GCATCGACCA CCGAGATGGG CGAGGCGATT GCTGCGCTGA TCGGCACCGC GGCGCGCTGA
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| Protein sequence | MQARYKIAVI PGDGIGREVM PEGLRALQAA ARRFDLAFDF TPIEWASCDY HARTGEMMPA
DWKAQLQGMD AIYFGAVGWP ATVPDHVSLW GSLLKFRREF DQYINLRPVR LFEGVPCPLA
GRRAGDIDYC VVRENTEGEY TNLGGVMFAG TEREIVIQES VFSRHGTDRV LKYAFELARS
RARKHLTVAT KSNGIAISMP WWDGRADAMA MAYPEVTVDK QHIDILSARF VLQPGRFDVV
VASNLFGDIL SDLGPATTGT IGLAPSANLN PERRFPSLFE PVHGSAPDIY GRNIANPVAM
IWSGALMLDF LGHRDAHDAI VRAIETVLAQ GPRTPDLGGS ASTTEMGEAI AALIGTAAR
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