| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2977 |
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| Symbol | |
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| ID | 6160603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3283123 |
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| End bp | 3284412 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665754 |
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| Product | integrase family protein |
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| Protein accession | YP_001792004 |
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| Protein GI | 171059655 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA TCAACAACCT GACCGACACC GCCATCCGCA AGGCGACTCC CGGCGAAAAG
CCGCGCAAGC TCGCTGATGG TGGCGGCCTG TACCTGGAAC TGCAGCCCAG TGGCGCGCGT
TACTGGCGGA TCAAGTACCG GCTCGACGGC AAGGAAAACC GGCTATCCCT CGGTGTCTAC
CCGGCCGTCA GCCTGGCCGA TGCGCGACGG CGCCGCGACG AAGTGCGAGC CCTGATCGCC
GCCGGCACCG ACCCCAGCCA GACCCGCAAA GACACGAAGG CAGCCAAGGT GCAGGTTCAG
GTGATCGCCA CGCTGCAGGC CGGCGGCGAG CCCCTGCCCG GCACCTTCGA GGCGGTGGCA
CTCGCCTGGC TGGTCATCCG CCGTGGCGAC TGGGCGCCGC GCTACTTCGA CAAGATCGAG
GCCCGGCTGG CCAACGACGT GTTTCCCTAC ATCGGCCACC TGCCCGTGGC TGACGTCACA
CCGCCTGCGC TGCTGGTGAT GCTGCGGCGC ATCGAGGCCC GGGGCGCCAT CGAGACCGCC
CGGCGGGTGC GCGAGACGTG CTCGCTGGTG TTTCGCTTCG CGGTGGCCGA AGGCAACGTG
ACCAGCGACC CCGCGCGCGA CCTGGCCGGC GCACTCAAGA CCCATACCAC CCGGCACATA
CCGGCCATCA CCGATCCGCA GCGCTTCGGT GAGCTGCTGC GCTCGATTGA CGCCTACCGC
GGCACGCCCG CGGTGCGCAC GGCGCTGCAA CTGGCCGCGC TGGTGTTCCT GCGGCCTGGT
GCTGAACTGC GTGAGGCGCA ATGGAACGAG TTCGACCTGG ATGCAGGCAC GTGGCTGGTG
CCTGCTGCGC GCATGAAGCG GCGCAAGACC GGCAAGGAGA ACGGGCCCGA CCACCTGGTG
CCGCTGAGCC GCCAGGCGGT GGCGCTGCTG CGCGATCTGC ACCCACTGAC CGGCCGCGGT
GCCTACCTGT TCCCGGGTGT GCGACACCGT GACCAGCCGA TGAGCGAGAA CACGCTGAAT
GCGGCGCTCG ACGCCATGGG ATACACCGGC GACGAACACC GCGCCCACGG CTTTCGGTCG
AGCGCCCGCA CGATGCTGCA CGAGCGCCTG AACCTACCTA CCGAGGCCAT CGAAGCGCAG
CTGGCGCACT CGGTGCCCGA TGCGCTGGGC CGGGCCTACA ACCGCACCGA ATTCGTCGCG
CAGCGCCGGC TGATGATGCA GACGTGGGCC GACTACCTCG ACCGTCTGCG CACCGGTGCG
CAGGTGGTGC ATTTCAAGGG CGTGGCGTGA
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| Protein sequence | MATINNLTDT AIRKATPGEK PRKLADGGGL YLELQPSGAR YWRIKYRLDG KENRLSLGVY
PAVSLADARR RRDEVRALIA AGTDPSQTRK DTKAAKVQVQ VIATLQAGGE PLPGTFEAVA
LAWLVIRRGD WAPRYFDKIE ARLANDVFPY IGHLPVADVT PPALLVMLRR IEARGAIETA
RRVRETCSLV FRFAVAEGNV TSDPARDLAG ALKTHTTRHI PAITDPQRFG ELLRSIDAYR
GTPAVRTALQ LAALVFLRPG AELREAQWNE FDLDAGTWLV PAARMKRRKT GKENGPDHLV
PLSRQAVALL RDLHPLTGRG AYLFPGVRHR DQPMSENTLN AALDAMGYTG DEHRAHGFRS
SARTMLHERL NLPTEAIEAQ LAHSVPDALG RAYNRTEFVA QRRLMMQTWA DYLDRLRTGA
QVVHFKGVA
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