Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2928 |
Symbol | nrdR |
ID | 6160030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3231825 |
End bp | 3232268 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665707 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001791958 |
Protein GI | 171059609 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTGCC CCTACTGCGG AAACGTTGAA ACCACCGTCG TCGAGACCCG CGAGTCCGAC GAGGGTGACG CCGTGCGTCG GCGCCGGCGC TGCAGCGCCT GCGACAAACG CTTCACCACC TACGAACGCG CCGAACTGGC GATGCCGGCG GTGGTCAAGA AGAACGGCGA CCGGCGCGAG TTCGACCGCG AGAAGCTGCG CGCCTCGATG ACGTTGGCGC TGCGCAAGCG CAATGTCAGC GTCGACCTGA TCGATGCCGC GATCGCCCGC ATCGAGGACA AGGTCTTCAC CAGCGGCGCC AGCGAAATGA GCACCTCGCG CATCGGCGAG ATGGTGATGC GCGAACTCAA GCGCCTCGAC AAGGTGGCCT ACGTGCGCTT CGCCTCGGTC TACCGCGAGT TCGAGGACAT CGACGCCTTC AGCAAGCTGA TCCAGGAAAT CTGA
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Protein sequence | MRCPYCGNVE TTVVETRESD EGDAVRRRRR CSACDKRFTT YERAELAMPA VVKKNGDRRE FDREKLRASM TLALRKRNVS VDLIDAAIAR IEDKVFTSGA SEMSTSRIGE MVMRELKRLD KVAYVRFASV YREFEDIDAF SKLIQEI
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