| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2883 |
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| Symbol | |
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| ID | 6160154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3173344 |
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| End bp | 3174585 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665662 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001791913 |
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| Protein GI | 171059564 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.55769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG TTGAAGTCAA AGTCCCCCAG TTGTCCGAGT CGGTCGCAGA AGCGACGATG
CTGACGTGGA AGAAGAAGCC CGGTGAAGCC GTGGCCATCG ATGAGATCCT GATCGAGATC
GAGACCGACA AGGTCGTGCT CGAAGTGCCC GCGCCGGCCG CCGGCGTGCT GGTCGCCCAC
GTGGTGGGTG ACGGCGGCAC GGTGGTCAGC GACCAGCTGA TCGCGCAGAT CGACACCGAA
GGCAAGGCCG GCGCTGTCGC TGCCGCCGCT GCGGCTGCCG CCCCCGCCGC CGCTGCCGCT
GCTCCGGCTG CCGCCGCCAA CAAGGGCGAC GTGGCTATGC CCGCCGCCGC CAAGATCCTG
GCCGAGAAGG GCCTGTCGGC CACCGACGTG GCCGGCTCCG GCAAGGACGG TCGCGTGACC
AAGGGTGATG CCCTGGCCGC CGGCGCCAAG CCCGCCGCCG CGCCGATCGT GGTCGCTGCA
GCACCGGCCG TTGCCAAGCC GCTGCCCGCC GTTGCCGCGC CGGTCGCACA GAACCTGGGT
GACCGCTCGG AACAGCGCGT GCCGATGAGC CGCCTGCGCG CCCGCGTCGC CGAGCGCCTG
CTGCAGTCGC AATCGACCAA CGCCATCCTG ACCACGTTCA ACGAAGTGAA CATGGCGCCG
GTGATGGAGA TGCGCAAGAA GTTCCAGGAC AAGTTCGAGA AGGAACACGG CGTCAAGCTC
GGTTTCATGA GCTTCTTCGT CAAGGCCGCG GTCGCCGCGC TGAAGAAGTA CCCGGTGCTC
AACGCCTCGG TCGACGGTAA CGACATCGTT TACCACGGCT ACTTCGACAT CGGCATCGCG
GTGGGTTCGC CGCGTGGCCT GGTGGTGCCG ATCATCCGCA ACGCCGACCA GCTGAGCTTT
GCCGACATCG AGAAGACTAT CGCCGGCTTC GGCCAGAAGG CCAAGGACGG CAAGCTGTCG
ATGGAAGAAC TGACCGGCGG CACCTTCTCG ATCTCCAACG GCGGTACCTT CGGCTCGATG
CTGTCGACCC CGATCATCAA CCCGCCGCAG TCGGCCATCC TGGGCGTGCA CGCCACCAAG
GACCGCGCCG TGGTCGAGAA CGGCCAGGTG GTCGTGCGTC CGATCAACTA CCTCGCCATG
TCGTATGACC ACCGCATCAT CGACGGCCGC GAAGCCGTGC TGGGCCTGGT GACGATGAAG
GACGCCCTGG AAGACCCGGC GCGCCTGCTG TTCGACATCT GA
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| Protein sequence | MAIVEVKVPQ LSESVAEATM LTWKKKPGEA VAIDEILIEI ETDKVVLEVP APAAGVLVAH
VVGDGGTVVS DQLIAQIDTE GKAGAVAAAA AAAAPAAAAA APAAAANKGD VAMPAAAKIL
AEKGLSATDV AGSGKDGRVT KGDALAAGAK PAAAPIVVAA APAVAKPLPA VAAPVAQNLG
DRSEQRVPMS RLRARVAERL LQSQSTNAIL TTFNEVNMAP VMEMRKKFQD KFEKEHGVKL
GFMSFFVKAA VAALKKYPVL NASVDGNDIV YHGYFDIGIA VGSPRGLVVP IIRNADQLSF
ADIEKTIAGF GQKAKDGKLS MEELTGGTFS ISNGGTFGSM LSTPIINPPQ SAILGVHATK
DRAVVENGQV VVRPINYLAM SYDHRIIDGR EAVLGLVTMK DALEDPARLL FDI
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