| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2871 |
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| Symbol | |
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| ID | 6159746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3160321 |
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| End bp | 3161502 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665650 |
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| Product | radical SAM protein |
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| Protein accession | YP_001791901 |
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| Protein GI | 171059552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGG TCAACCTGCT CGATTTCGAC CTCGACGCGC TGGCCGCCTA CTGCGAGCAG
CTGGGCGAGA AGCGTTTCCG TGCGGTCCAG CTGTTCCGCT GGATCCACCA GCGCGGCGCG
GCCGATTTCG GCCAGATGAG CGATCTGGCC AAGTCGCTGC GCAGCAAGCT CGCCGACGTG
GCGTGCATCG CGCCCCTGCG GGTGCTGTCC GAACACCGCT CGTCCGACGG CACGATCAAG
TGGCTGTTCG ACGTGGGTGA CGGCAACGCC GTCGAGACCG TCTACATCCC CGAGGACGAC
CGCGCCACGC TGTGCATCTC GTCGCAGGCG GGCTGTGCGG TGGGCTGCCG TTTCTGCTCG
ACCGGACACC AGGGCTTTTC ACGCAACCTG AGCACCGCCG AGATCCTGGC GCAGCTCTGG
TATGCCGAGC ACAGCCTGCG CCGCGAGCGC GCCGAGGGTG TTTCGGTGGG CGCGCGTGCG
GCCACCGGCC CGGCCAGCGA GCGCATCATC AGCAACGTCG TGATGATGGG CATGGGCGAG
CCGCTGCAGA ACTACGCCGC CGTGCTGCCG GCCCTGCGCG TGATGCTCGA CGACCACGGC
TACGGCCTGT CGCGGCGCCG CGTGACGGTC TCGACCTCCG GCGTGGTGCC GATGATCGAT
CGCCTGGCCG CCGATTTGCC GGTGGCGCTG GCGGTGTCGC TGCATGCGTG CGACGACGCG
CTGCGCGACG TGCTGGTGCC GCTCAACCGC AAGTACCCGC TGGCCGAACT GCTGGGCGCC
TGCCAGGCGT ATCTGGCTTC GGCGCCGCGC GACTTCATCA CCTTCGAATA CTGCATGCTC
GACGGCGTCA ACGACAGCGA CGAGCAGGCG CGTGCGTTGC TCAAGCTGGT CGGCGACAAG
GGGCCGGTCG GGCGCCTGCC GTGCAAGTTC AACCTGATCC CGTTCAACCC CTTCCCCGAG
TCGGGCCTCA AGCGCTCGGG CAACGAGCGC GTGCAGGCCT TCGCCCAGGT GCTGATCGAC
GGTGGCCTGG TGACCACCGT GCGCAAGACC CGCGGCGACG ACATCGACGC CGCCTGTGGC
CAGCTCGCCG GCGAGGTGCA GGACCGCACC CGCGTCCAGG AGCGCATGAC GCGCTCGCCG
ATCCGCGTGA TCCGCTCGGC CGCCCAGCCC GACGCCGCTT GA
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| Protein sequence | MTAVNLLDFD LDALAAYCEQ LGEKRFRAVQ LFRWIHQRGA ADFGQMSDLA KSLRSKLADV
ACIAPLRVLS EHRSSDGTIK WLFDVGDGNA VETVYIPEDD RATLCISSQA GCAVGCRFCS
TGHQGFSRNL STAEILAQLW YAEHSLRRER AEGVSVGARA ATGPASERII SNVVMMGMGE
PLQNYAAVLP ALRVMLDDHG YGLSRRRVTV STSGVVPMID RLAADLPVAL AVSLHACDDA
LRDVLVPLNR KYPLAELLGA CQAYLASAPR DFITFEYCML DGVNDSDEQA RALLKLVGDK
GPVGRLPCKF NLIPFNPFPE SGLKRSGNER VQAFAQVLID GGLVTTVRKT RGDDIDAACG
QLAGEVQDRT RVQERMTRSP IRVIRSAAQP DAA
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