Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2863 |
Symbol | |
ID | 6159964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3152113 |
End bp | 3152355 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641665642 |
Product | RNA chaperone Hfq |
Protein accession | YP_001791893 |
Protein GI | 171059544 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCAACA AAGGGCAATT GCTACAAGAC CCGTTTCTGA ACCTGCTGCG CAAAGAGCAT GTGCCGGTCT CGATCTATCT GGTCAACGGC ATCAAGCTGC AAGGCCACAT CGAGTCGTTC GACCAGTACG TCGTCCTGCT GCGCAACACG GTCACGCAAA TGGTCTACAA GCATGCAATT TCCACTGTGG TCCCGGGTCG CCCCGTGAAT TTCCACGCCA CCGAAGCCCA GGACTCCAAC TGA
|
Protein sequence | MSNKGQLLQD PFLNLLRKEH VPVSIYLVNG IKLQGHIESF DQYVVLLRNT VTQMVYKHAI STVVPGRPVN FHATEAQDSN
|
| |