| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2858 |
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| Symbol | |
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| ID | 6161858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3147182 |
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| End bp | 3148345 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665637 |
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| Product | tRNA synthetase class II (G H P and S) |
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| Protein accession | YP_001791888 |
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| Protein GI | 171059539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
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| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAG CTTGGCTTTT GCCCGAGCAC ATAGCCGATG TGCTGCCGCA CGAAGCGCGC
CGCATCGAAG AGTTGCGGCG CATCATGCTC GACGCTGCGC GCACCTGTGG CTACGAGTTG
GTCATGCCGC CGCTGCTCGA ATACATCGAA TCCCTGCTCT CCGGCACCGG GCACGAGCTG
GATCTGAAGA CCTTCAAGCT GGTGGATCAG CTCAGCGGCC GCACGCTCGG TGTGCGTGCC
GACACGACGC CGCAAGTTGC GCGCATCGAC GCGCACCTGC TCAACCGTGC CGGCCTGACG
CGGCTGTGCT ACTGCGGCCC GGTGCTGCAC ACGCGGCCGG CCGGATTGCA TGGCAGCCGC
GAACCGCTGC AGTTCGGGGC CGAGACCTAC GGTCACGCCG GGCTCGAAGC CGATCTCGAG
GTGCTCGAGC TGGCGATCGA CTGCCTGAGC CTGGCGGGTA TCCAGGGTCT GGTGCTGGAT
CTTTCGGATG CGCGCCTGCT GCGCGGCGTG CTCGGATCGG CAGCCATTTC GGCATCGGTC
CTCGAAGCGG TGCAATCGGC GTTGGCCGCC AAGGATCGGG CCGAGCTCGA GGCCATCGGG
GCCGAGTTGC CACCTGCCGT GCGTGACGGC CTGCTCGCTC TGGTCGACCT GTATGGTGAC
AGCGGTGTTC TCGATCTGGC GCGGCAACGG CTTCCGGCCG TGCCGATGAT CGAGGCCGCG
CTCGCCGACC TGGCCTGGCT GGCCCGGCAC ATCGGTGCGG TCCATCCGGC TGTCACGGTC
GGCTTCGATC TGGGCGACAT GTCGGGGCAT GCCTATTACA GCGGTGCCCG GTTTGCGATC
TACGGCCGGG GCGGCATCGA TGCCCTGGCA CGTGGTGGCC GTTACGACGA TGTCGGTGCC
GTCTTCGGTC GCAAGCGGCC TGCTGCGGGC TTCAGTCTCG ACCTGAAGAC CGTGGTGGGC
CTGGTCGGTT TCGATGGCCG TCGTTCGGCG ATCCGTGCAC CCTGGAGCGA AGACCCGGGC
CTGCGCGCCG AGGTCCGACG CCTGCGCGGC GAAGGCCACG CCGTGGTCTG CGCGCTGCCG
GGCCACGAGC ATGAGGCGGA TGAATTTGAT TGCGACCGCG AGTTGGTCGC CGAGCATGGC
CAGTGGCAGG TGCGGTTGCG CTGA
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| Protein sequence | MSSAWLLPEH IADVLPHEAR RIEELRRIML DAARTCGYEL VMPPLLEYIE SLLSGTGHEL
DLKTFKLVDQ LSGRTLGVRA DTTPQVARID AHLLNRAGLT RLCYCGPVLH TRPAGLHGSR
EPLQFGAETY GHAGLEADLE VLELAIDCLS LAGIQGLVLD LSDARLLRGV LGSAAISASV
LEAVQSALAA KDRAELEAIG AELPPAVRDG LLALVDLYGD SGVLDLARQR LPAVPMIEAA
LADLAWLARH IGAVHPAVTV GFDLGDMSGH AYYSGARFAI YGRGGIDALA RGGRYDDVGA
VFGRKRPAAG FSLDLKTVVG LVGFDGRRSA IRAPWSEDPG LRAEVRRLRG EGHAVVCALP
GHEHEADEFD CDRELVAEHG QWQVRLR
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