Gene Lcho_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2839 
Symbol 
ID6163107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3125741 
End bp3126187 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content65% 
IMG OID641665617 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_001791869 
Protein GI171059520 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA TGGACATCCA CCAGATCCTC AAGAAGCTGC CGCACCGCTA CCCGATCCTG 
CTGGTGGACC GCGTGGTCGA ACTCGAGCTC AACAAGCGCA TCCAGGCGCT GAAGAACGTC 
ACCATCAACG AGCCGTTCTT CATGGGCCAC TTCCCGCACC GGCCGGTGAT GCCGGGCGTG 
CTGATCCTCG AGGCGCTGGC GCAGGCGTCG GCGCTGCTGT CGTTCGCGTC GATGGGCGAG 
GACCCGGGCG ACGACACGGT GGTGTATTTC GTCGGCATCG ACGGCGCGCG CTTCAAGCGC 
CCGGTCGAGC CGGGTGACCA GCTGATCCTC GAATCGACCC TGGTGCGCGC CAAGGGCGGT 
ATCTTCAAGT ACCAGACCCG TGCCACGGTC AACGGCGAGC TCGCCACCGA GGCCGAGCTG 
ATGTGCACGA TGCGCAAGAT CGCCTGA
 
Protein sequence
MTVMDIHQIL KKLPHRYPIL LVDRVVELEL NKRIQALKNV TINEPFFMGH FPHRPVMPGV 
LILEALAQAS ALLSFASMGE DPGDDTVVYF VGIDGARFKR PVEPGDQLIL ESTLVRAKGG 
IFKYQTRATV NGELATEAEL MCTMRKIA