Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2825 |
Symbol | |
ID | 6161632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3112327 |
End bp | 3113022 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641665603 |
Product | hypothetical protein |
Protein accession | YP_001791855 |
Protein GI | 171059506 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA GCCTGCACAC CTACACCGGC AACGCTGGCA CGGGAGCGCT GGGCCTGCAG CGCAACCGCG TGCTGCGCAA CACGTACGGG CTGCTCGCGC TGTCGATGCT GCCCACCGTC CTGGGCGCCT GGATCGGCGT CTCGACCGGC ATCATGGCCG CACTCGGAAC GGGCGCCTCG CTGGCGGTGT TCCTGATCGG CGCCTTCGGT TTCATGTTCG CGATCGAAAA GACCAAGGAA TCGGCGACCG GCGTGGCCGT GCTGCTGGCC TTCACGTTCT TCATGGGCCT GATGCTGTCG CGCATGCTGG CCGCAGTGCT GGGCTTCAAG AACGGCGGCT CGCTGATCAT GATGGCCTTC GGCGGCACCG CCGGCGTCTT CTTCGCGATG GCGACGCTCG CCACCGTGAT CAAGCGCGAC CTCAGCGGCA TGGGCAAGTT CCTGTTCGTC GGCGCGATCG TCCTGCTGGT GGCCGGCCTG ATCAACGTTT TCGTGCAGTC GACGGCGCTG ATGGCGACCC TGTCGGTGAT CGCGATCGGC CTGTTCTCGG CCTTCATGCT GTACGACATC AAGCGCGTGC TCGACGGCGG CGAAACCAAC TACATCAGTG CCACGCTGGC GATCTACCTG GACATCTACA ACGTGTTCCA GAGCCTGCTG GCCCTGCTGG GCATCTTCGG CGGCGAGCGC GACTGA
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Protein sequence | MNQSLHTYTG NAGTGALGLQ RNRVLRNTYG LLALSMLPTV LGAWIGVSTG IMAALGTGAS LAVFLIGAFG FMFAIEKTKE SATGVAVLLA FTFFMGLMLS RMLAAVLGFK NGGSLIMMAF GGTAGVFFAM ATLATVIKRD LSGMGKFLFV GAIVLLVAGL INVFVQSTAL MATLSVIAIG LFSAFMLYDI KRVLDGGETN YISATLAIYL DIYNVFQSLL ALLGIFGGER D
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