Gene Lcho_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2821 
Symbol 
ID6161628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3106504 
End bp3106980 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID641665599 
Producttranscription elongation factor GreA 
Protein accessionYP_001791851 
Protein GI171059502 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA TTCCGCTGAC CAAACGTGGC GCTGAACTGC TCAAGGAAGA GCTGCAGCGC 
CTGAAGACCA TCGAACGTCC GTGGGTGATC AATGCGATTG CCGAAGCGCG CGCCCAGGGG 
GACCTGTCCG AGAACGCCGA GTACGAAGCC GCAAAGGACA AGCAGGGCTT CATCGAAGGC 
CGCATCCTGG ACGTCGAGGG CAAGCTGGCG ATCGCCCAGG TGATCGACCC GGCCGTGCTC 
GATGCCGGCG GACGGGTGGT GTTCGGCGCC ACCGTCGATC TGGAGGAGGA AGAAAGCGGC 
GACGCCGTGA CCTACCAGAT CGTCGGCGAG GACGAGGCCG ATCTCAAGAA GGGACTGGTC 
TCCGTCGGCT CGCCGATCGC CCGCGCCCTG ATCGGCAAGG AAGCCGGTGA CGTGGCCGAG 
GTTCAGGCGC CCGGTGGCGT CAAGCGCTAC GAGGTCGTCG AAGTGCGTTA CGTCTGA
 
Protein sequence
MATIPLTKRG AELLKEELQR LKTIERPWVI NAIAEARAQG DLSENAEYEA AKDKQGFIEG 
RILDVEGKLA IAQVIDPAVL DAGGRVVFGA TVDLEEEESG DAVTYQIVGE DEADLKKGLV 
SVGSPIARAL IGKEAGDVAE VQAPGGVKRY EVVEVRYV