Gene Lcho_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2813 
Symbol 
ID6161854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3098157 
End bp3099125 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID641665591 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001791843 
Protein GI171059494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAT CTTCGGGGTC AAGTGACCCT CGCGCGACGG TTCGCGCACC CTGGGCGGAC 
ACCCTGTTCG CCTTGCTGGC GCAGTCGGCC GCTTGGCTGA CTCTCGCGCT GTTGCTGGGC 
ATCATCGCTT CGCTCGTGCT CGGCGCCATG CCGGCGATCC GCGAGTACGG CCTGTCGTTC 
CTGTGGCGCA GCGAGTGGGA TCCGGTCGAG AACCGCTACG GCGGTCTCGT GATGATCTAC 
GGCACGCTGA TGACCTCGTT CATCGCCCTG CTGATCGCGG TGCCGGTGAG TTTCGGCATC 
GCGCTTTTCC TCACCGAACT GTCGCCGACC TGGCTCAAGC GACCGCTCGG GATCGCGGTC 
GAGCTGCTGG CGGCGGTGCC TTCGATCGTC TACGGCATGT GGGGACTGCT GGTGTTCGGG 
CCGATCCTGG CAGAGTTCGT CCAGCAGCCG CTGCAGGCCG TCACGAGCGA CATTCCTGTC 
CTGGGAACGC TGTTCGCGGG TCCGCCGGTG GGCATCGGCA TCCTGTCGGC CGGCATCATC 
CTGGCGATCA TGATCATCCC GTTCATCGCC TCGGTGATGC GTGACGTCTT CGAGGTGACG 
CCGCCGATGC TCAAGGAATC CGCCTACGGG CTGGGTTCGA CCACCTGGGA GGTGGTCTGG 
AACGTGGTAC TGCCCTACAC CAAGATCGGC GTGGTCGGCG GCGTGATGCT CGGGCTCGGC 
CGGGCTCTGG GCGAGACGAT GGCCGTGACT TTCGTGATCG GCAACATGAA CCAGCTCGAC 
TCGCTGTCGG TGTTCGAGGC GGCCAACAGC ATCACATCGG CGCTCGCCAA CGAGTTCGCC 
GAGGCGGCTG ACGGCCTGCA CCAGGCTTCG CTGATCTACC TCGGGCTGGT CCTGTTCTTC 
ATCACCTTCG TGGTGCTGGC GCTGTCCAAG GTGCTGCTGG CGCAACTCAA GAAAGGCGAG 
GGCAACTGA
 
Protein sequence
MAQSSGSSDP RATVRAPWAD TLFALLAQSA AWLTLALLLG IIASLVLGAM PAIREYGLSF 
LWRSEWDPVE NRYGGLVMIY GTLMTSFIAL LIAVPVSFGI ALFLTELSPT WLKRPLGIAV 
ELLAAVPSIV YGMWGLLVFG PILAEFVQQP LQAVTSDIPV LGTLFAGPPV GIGILSAGII 
LAIMIIPFIA SVMRDVFEVT PPMLKESAYG LGSTTWEVVW NVVLPYTKIG VVGGVMLGLG 
RALGETMAVT FVIGNMNQLD SLSVFEAANS ITSALANEFA EAADGLHQAS LIYLGLVLFF 
ITFVVLALSK VLLAQLKKGE GN