| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2805 |
|---|
| Symbol | |
|---|
| ID | 6161919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3090251 |
|---|
| End bp | 3090580 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641665583 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001791835 |
|---|
| Protein GI | 171059486 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.686799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG ACCTCATCAA ACACGTTTCC GATGCGACCT TTGACGGCGA CGTCGTTCAA
TCAGACAAAC CCGTTCTGGT GGACTACTGG GCCGAATGGT GCGGCCCCTG CAAGATGATT
GCCCCGATCC TTGACGAAGT GGCCAAGGAC TACAGCGGTC GCCTGCAGAT CGCCAAGATG
AACGTCGACG AGAACCGCGA AGTGCCTGCC AAGTTCGGCA TTCGCGGCAT CCCGACGCTG
ATGCTGTTCA AGGGCGGTCA GCTGGCTGCC ACCAAGGTCG GGGCGCTCTC GAAGGCGCAG
TTGACGTCTT TCCTCGACGC CCACCTATAA
|
|---|
| Protein sequence | MSSDLIKHVS DATFDGDVVQ SDKPVLVDYW AEWCGPCKMI APILDEVAKD YSGRLQIAKM
NVDENREVPA KFGIRGIPTL MLFKGGQLAA TKVGALSKAQ LTSFLDAHL
|
|---|
| |