| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2776 |
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| Symbol | |
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| ID | 6162267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3059193 |
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| End bp | 3060125 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641665553 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001791806 |
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| Protein GI | 171059457 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000169467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGACT TCATTTCCAG CGGCTGGTCG CTCTTCGTGG CCGGCGTGGT CGCCCTCGGC
CTGGTGTTCT GCGTTGTCCT GCTGGTGATC GCCAGCAAGC GCAAGGTGAT GGCCAACGAC
AACACCACCG GCCACGTCTG GGACGAAAAC CTGCAGGAAC TCAACAACCC GCTGCCGCGC
TGGTGGATGG GCCTGTTCGT GATCACCGTG GTGTTCGCGG TGCTCTACCT GGCGATCTAC
CCGGGTTTCG GCAGCAGCGA AGGCGCCCTC AAGTGGAGCA GCGTGGGTCA GTGGGAAAAG
GAGCAGGCCA AGGCCAAGGA GGCTCTGACC CAGGTCTATG CCCAGTTCGA GAACATGCCG
GTCGAGACGC TGGCTGCCAA CACGCAGGCG ATGGGCATCG GCGAGCGGCT GTTCTCCAAC
AACTGTGCCG GCTGCCATGG CTCGGACGCG CGCGGCAGCA AGACCTTCCC CAACCTGACC
GACGGCGACT GGCTCGGTGG TGACGGCAGT CCCGCCTACA TCGCCAAGAC CATCGCCGAA
GGCCGTCAGG GCATGATGCC GCCGATGGCT GCCGCAGTGG GTGGCCCGGA GGACGTCAAG
AACGTCGCCA ACTACGTGCT CAGCCTGTCG GGCAGCGCCC ACAACAGCAT TTCCGCGCAG
CTGGGCAAGA GCAAGTTCGG CGCTTGCGCG GCCTGCCACG GCGCTGATGG CAAGGGAACC
CAGGCACTGG GTGCCCCCAA CCTGACCGAC AAGATCTGGC TGCACGGCTG GGGCGAAGAA
GCGGTCATCG CCATCATCAA CAACGGCAAG TCGAACATGA TGCCGCAGCA TGCATCGCGT
CTGACGCCGG AGCAGATCAA GGTGCTGGCG GGTTATGTCT GGAGCCTGTC GCGCAAGCCG
GCAGCACAGA CCGCGCTGAA CACGGTGCAA TGA
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| Protein sequence | MSDFISSGWS LFVAGVVALG LVFCVVLLVI ASKRKVMAND NTTGHVWDEN LQELNNPLPR
WWMGLFVITV VFAVLYLAIY PGFGSSEGAL KWSSVGQWEK EQAKAKEALT QVYAQFENMP
VETLAANTQA MGIGERLFSN NCAGCHGSDA RGSKTFPNLT DGDWLGGDGS PAYIAKTIAE
GRQGMMPPMA AAVGGPEDVK NVANYVLSLS GSAHNSISAQ LGKSKFGACA ACHGADGKGT
QALGAPNLTD KIWLHGWGEE AVIAIINNGK SNMMPQHASR LTPEQIKVLA GYVWSLSRKP
AAQTALNTVQ
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