Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2771 |
Symbol | |
ID | 6163404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3054689 |
End bp | 3056152 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665548 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001791801 |
Protein GI | 171059452 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0315162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACGA CGATCTCCGC AGGCACGCAG CCCCAATCCG CGACCACGAT CAACGCCGAC GTGGCCGCCA CGGACCACCA GCCGGTTCTG AGCGAGGAAC TGCTGCGCCG CATGGACGGC CCCGGGCCAC GCTACACCTC CTACCCCACG GCGGATCGTT TCGTCGAGGC CTACACCGCC GATCACTACC GCCAGGCACT GTCCCAGCGC AGCATCGGTG CGGTGGGCGG CGCAGGTGGG CCGCTGTCGG TCTACGTGCA CGTGCCGTTC TGCGAATCGG TCTGCTATTA CTGCGCCTGC AACAAGATCG TCACCCGCGA CCACGGCCGC TCGACCGCCT ACATCGACGC GCTGGCGCGC GAGCTGGAAC TGGTCACGCA GACGCTCGGC CGGGGCCAGC GCGTCTCGCA ACTGCATTTC GGCGGCGGCA CGCCCACCTT CCTGAGCGAT GCCGAACTCG ACCGCCTGAT GGGCGAGTTG CGCCGGCATT TCCACATCGA GCCGCATGGC GAATATTCGA TCGAGATCGA CCCGCGCACC GTCAGCCGCG AGCGCCTGGC TCACCTCAAG GAGCTCGGCT TCAACCGGGT CTCGTTCGGC GTGCAGGATT TCGACGCCGA CGTGCAGAAG GCGGTGCACC GCGTCCAGCC TTTCGAGCAG GTCGAGGCGC TGATGAAGGA TGCGCGCGAG CTCGGCTTCC ATTCGATCAA CGTCGACCTC ATCTACGGCC TGCCCAAGCA GACGCCCGAG AGCTTCGCGC GCACCGTGCG CCAGGTCGCC GGACTGCGGC CCGACCGCAT CGCGATGTAC GGCTACGCCC ACCTGCCGCA GCGCTTCAAG CCGCAGCGTC GCATCGTCAC CGAAGAGCTG CCGCGTGGCA GCGACCGCAT CGGCATGCTG TCGCAGGCCA TCAGCGGCTT CATCAGCCAC GGCTACCAGT ACATCGGCAT GGATCACTTC GCGCTGCCCG AGGACGGCCT GGCGCAGGCC AAGCGGCAAG GGCGGCTGCA CCGCAACTTC CAGGGCTACA GCACGCAGGC CGACTGCGAC CTGATCGCGC TGGGCGTGTC GGCCATCGGC CGCATCGGCG CCACCTACAG CCAGAACGCC AAGACGCTCG ACGACTACTA CGACTCGCTC AACCGCGGCG AGCTGCCGGT GGTGCGCGGC CTGGCCCTGA CGCGCGACGA CCTGGTGCGC CGCGCCGTCA TCATGTCCAT CATGTGCCAC GGCCGGCTGA GCTACGAGTC GGTCGCCCTG GCACACTTGA TCGACGTGAA AACCTACTTT GCCACCGAAC TCGAAGCCCT GGTCGACCTG GCCGACCAAG GCCTGCTGAC GCTCGACCCG GATGGCTTCG AACTCACCCC GCTGGGCTGG TACTTCGTGC GCTCGGTGGC GATGGTGTTC GATCGCCACC TGCGCGCCGA CCAGACCCGC GAGCGCTTCT CGCGCGTGAT CTGA
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Protein sequence | MHTTISAGTQ PQSATTINAD VAATDHQPVL SEELLRRMDG PGPRYTSYPT ADRFVEAYTA DHYRQALSQR SIGAVGGAGG PLSVYVHVPF CESVCYYCAC NKIVTRDHGR STAYIDALAR ELELVTQTLG RGQRVSQLHF GGGTPTFLSD AELDRLMGEL RRHFHIEPHG EYSIEIDPRT VSRERLAHLK ELGFNRVSFG VQDFDADVQK AVHRVQPFEQ VEALMKDARE LGFHSINVDL IYGLPKQTPE SFARTVRQVA GLRPDRIAMY GYAHLPQRFK PQRRIVTEEL PRGSDRIGML SQAISGFISH GYQYIGMDHF ALPEDGLAQA KRQGRLHRNF QGYSTQADCD LIALGVSAIG RIGATYSQNA KTLDDYYDSL NRGELPVVRG LALTRDDLVR RAVIMSIMCH GRLSYESVAL AHLIDVKTYF ATELEALVDL ADQGLLTLDP DGFELTPLGW YFVRSVAMVF DRHLRADQTR ERFSRVI
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