| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2760 |
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| Symbol | |
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| ID | 6161393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3039794 |
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| End bp | 3041617 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665537 |
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| Product | sulphate transporter |
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| Protein accession | YP_001791790 |
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| Protein GI | 171059441 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.207505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACGC AGACGCCCCC CATCCCCGCC GACGAGCCGG TTGCCGACAC CCGCAACCCG
CGCCTGCACC GCTTCCGGCC ACGCCTGCTC GACAGCCTGA AGGGCTACGA CCGGTCGCAG
TTCGGGGCCG ACCTCGGTGC CGGACTCACG GTGGGTGTGG TGGCGCTGCC ACTGGCGATG
GCGTTCGCGA TCGCCTCGGG CGTCAAACCC GAGGCCGGCA TCTTCACCGC CATCATCGCG
GGCTTCCTGA TCTCGGCGCT GGGCGGCTCG CAGGTGCAGA TCGGCGGGCC GGCGGGCGCG
TTCATCGTCA TCGTCTACGG CATCGTCGAG CGTTACGGCC TGGCCAACCT GCTGATCTCG
ACCATGCTGG CCGGCATGCT GCTGATGCTG CTGGGGCTGT TCAAGCTCGG CGCGATGGTG
CGCTACATCC CGGTCAGCAT CGTGATCGGC TTCACCAACG GCATCGCGGT GCTGATCGCG
CTGTCGCAGG TGAAAGACCT GTTCGGGCTG CAGATCGACA AGCTGCCGGC CGACTTCTTC
ACCCAGCTGC GGGTGCTGGG CGGCGCGCTG CACACGCTCA ATCCGGTGGC GTTGCTGGTG
GGCGGGCTGT GCCTGGCGCT GGTGGTGGTG TGGCCCAAGA GCTACCGCAT GGATGTCGAC
CCGCACAGCG CGCGCGCGCG CTTTTCGCGC ATCGCCGCGC ACGTGCCGGG CACGCTGGTG
GCGCTGGTGC TGGCGACCAC GCTGACGGCC TTGCTGAACC TGCCGCTGGA GACCATCGGC
CAGCGCTTCG GCGGCATCCC GCGCACGCTG CCGTCGCTGG CGTTTCCGGA GGTCAGCTGG
GCCACCGCCA AGCTGCTGCT GATGCCGACG CTGACGATCG CGCTGCTGGG TGCGATCGAG
TCGCTGCTGT GCGCGCGGGT GGCCGACAAC ATGGGCGAGT TCAAGCGCCA CGACCCGAAC
CAGGAGCTGA TGGCGCAGGG CGTGGCCAAC CTGGTGGCGC CGCTGTTCGG CGGCATCCCG
GCCACCGGCA CCATCGCGCG CACCGTCACC AACGTGCGCG CCGGTGCCCG CACGCCGGTG
GCCGGCATGG TGCACGCGCT GGCGCTGCTG CTGGTGGTGC TGGTGGCCGC GCCGCTGGCG
CTGCACGTGC CGCTGGCGGC GCTGGCCGGC ATCCTGCTTT TCGTGGCCTG GAACATGGGC
GAGTGGCGCG AGTTCGCCCG CCTCAAGCAG TTCAACATGC CCTACCGCAC GGTGCTGGTC
GGCACCTTCG TGCTGACGGT GGTGTTCGAC CTGACGGTGG CGGTCGAGGT CGGCCTGATC
CTGGCGTGCG GCTTCTTCAT CTGGCGCATG GGCCAGCTCT TCAGCGTGCA GCGCCTGGGC
GAACACCCGC AGGCCGGCGC GATGGTGGCC GCGGTCGACG ACGACGACGC ATCGCCGAGC
CCGACCCCCG TGCCGCCCGT GCCGCAAGCC TTGCCCGACG GCGTCGAGGT GCGCGAGCTC
TACGGCGCGC TGTTCTTCGG CGCGGTCGGC AAGATCGAGG GCCTGGCCGA GCAGCTGCCC
GCGTCGACCC GGCTGCTGGT GCTCGAGATG CACCGGCTGA TCTGGATGGA CACCTCGGGG
CTCGATGCGC TCGAGCAACT GCACCGCCAG CTGCACCGAC AGGGCATCGC GCTGCGCCTG
GCGGCCGCGC ATGCGCAGCC GCTGTCGCTG CTGCGGCGCT CGGGTTTTGC CGATCAGCTG
GGCGTGCACG GCATCGCCGC GACCCTGGCC GAGGCACTGG CCGAACCGCC GTCGGCAGAC
GCTGCTGCAC AGCACAAGCC GTAA
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| Protein sequence | MSTQTPPIPA DEPVADTRNP RLHRFRPRLL DSLKGYDRSQ FGADLGAGLT VGVVALPLAM
AFAIASGVKP EAGIFTAIIA GFLISALGGS QVQIGGPAGA FIVIVYGIVE RYGLANLLIS
TMLAGMLLML LGLFKLGAMV RYIPVSIVIG FTNGIAVLIA LSQVKDLFGL QIDKLPADFF
TQLRVLGGAL HTLNPVALLV GGLCLALVVV WPKSYRMDVD PHSARARFSR IAAHVPGTLV
ALVLATTLTA LLNLPLETIG QRFGGIPRTL PSLAFPEVSW ATAKLLLMPT LTIALLGAIE
SLLCARVADN MGEFKRHDPN QELMAQGVAN LVAPLFGGIP ATGTIARTVT NVRAGARTPV
AGMVHALALL LVVLVAAPLA LHVPLAALAG ILLFVAWNMG EWREFARLKQ FNMPYRTVLV
GTFVLTVVFD LTVAVEVGLI LACGFFIWRM GQLFSVQRLG EHPQAGAMVA AVDDDDASPS
PTPVPPVPQA LPDGVEVREL YGALFFGAVG KIEGLAEQLP ASTRLLVLEM HRLIWMDTSG
LDALEQLHRQ LHRQGIALRL AAAHAQPLSL LRRSGFADQL GVHGIAATLA EALAEPPSAD
AAAQHKP
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