| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2751 |
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| Symbol | |
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| ID | 6163990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3030326 |
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| End bp | 3031897 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665528 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001791781 |
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| Protein GI | 171059432 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.132633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGA TCCAGGTCTA CGTGCCGCGC GACAGCGCCG CACTCGCCGT CGGTGCCGAC
GAGGTGGCCG ACGCGATCGT CGCCCAGGCC GCCGCACGCG GCGCGCAGGT CGAGCTGATC
CGCAACGGCT CGCGCGGGCT GTTCTGGCTG GAACCGCTGG TCGAGGTGAT GACGGCCGCC
GGCCGGGTCG CCTACGGGCC GGTGGCGGTC GAGGATGTCG CGGGACTGTT CGACGCCGGG
TTCCTGTCCG GCGGCGCGCA CCCGCTGGGC CACGGCGTCA CCGCCGAGAT CCCCTACCTG
GCGCGCCAGC AGCGCCTGAC CTGCGTGCGC ATGGGCGTGA CCGATCCGCT GTCGCTCACC
GATTACGCCA CCCACGGCGG CTGGGCCGGG CTGCGCCAGG CGCTGCAGAT GCCGGCCGAC
GGCATCTGGC AGACGGTGCT CGACTCCGGC CTGCGCGGGC GCGGTGGCGC GGCGTTTCCG
GCCGGCATCA AGTGGCGCAC GGTGGCGCAG GCCCAGGCCG ATCAGAAGTA CGTCGTCTGC
AATGCCGACG AGGGCGACTC GGGCACCTTT GCCGACCGCA TGGTGCTGGA GGACGACCCC
TATCTGCTGA TCGAAGGCAT GACGATCGCC GCGCTCGCCT GCGGCGCCAC GCGCGGTTAT
GTCTACGTGC GCAGCGAGTA CCCGCTGGCG GTGCAGGTGT TCGGAGAGGC GATCGAGCGT
GCCCGCACCG CCGGCTACCT GGGCGACAAC ATCCTCGGCA GCGGCCACGC CTTCGAGCTG
GAAGTGCGCA TGGGCGCGGG CAGCTACGTC TGCGGCGAAG AGACCGCGAT GCTCGAAAGC
CTGGAAGGCA AACGCGGCAT CGTGCGCGCC AAGCCGCCGA TCCCGGCGCT CAGCGGCCTG
TTCGGCCAGC CGACGGTGAT CAACAACGTG CTGACCTTCG CGGCCGCGCC GTGGATCCTG
AGCCATGGCG CGCAGGCCTA CAAGGACCAC GGCCGCGGTC GCTCGACCGG CACGCTGCCG
TTCCAGCTGG CCGGCAACAT CGCCCGCGGC GGGCTGGTCG AGCTGGCCTT CGGCGTGACG
CTGCGTGAAC TGGTGTTCGA CTGGGGCGGC GGCAGCGCCA GCGGCCGGCC GGTCAAGGCG
GTGCAGGTGG GCGGGCCTCT CGGCACCTAT CTGCCCGAGT CGCAGTGGGA CATCCCGCTC
GATTACGAGG CCTACGCCGC AGTGGGCGCA GTCGTCGGCC ACGGCGGGCT GGTGGTGCAT
GACGACACGG CGGATCTGTC GAAACTGGCG CGCTACGCGA TGGCGTTCTG CGCCATCGAG
AGCTGCGGCA AGTGCACGCC GTGCCGGATC GGCTCGACGC GTGGTGTCGA GGTGATCGAC
CGCATCGTCA CCAATCACCA TCAACCGGCG GTGCGCGAGC AGCAGGTCAA GCTGCTGCGC
GACCTCTGCG ACACGATGGT CAGCGGCAGC CTGTGCGCGA TGGGCGGCAT GACGCCGTAC
CCGGTGCTGT CGGCGCTGAA TCATTTCCCG GCCGATTTCG GCCTCGCCGC CGATCAGCGG
TCGGCGGCGT GA
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| Protein sequence | MKAIQVYVPR DSAALAVGAD EVADAIVAQA AARGAQVELI RNGSRGLFWL EPLVEVMTAA
GRVAYGPVAV EDVAGLFDAG FLSGGAHPLG HGVTAEIPYL ARQQRLTCVR MGVTDPLSLT
DYATHGGWAG LRQALQMPAD GIWQTVLDSG LRGRGGAAFP AGIKWRTVAQ AQADQKYVVC
NADEGDSGTF ADRMVLEDDP YLLIEGMTIA ALACGATRGY VYVRSEYPLA VQVFGEAIER
ARTAGYLGDN ILGSGHAFEL EVRMGAGSYV CGEETAMLES LEGKRGIVRA KPPIPALSGL
FGQPTVINNV LTFAAAPWIL SHGAQAYKDH GRGRSTGTLP FQLAGNIARG GLVELAFGVT
LRELVFDWGG GSASGRPVKA VQVGGPLGTY LPESQWDIPL DYEAYAAVGA VVGHGGLVVH
DDTADLSKLA RYAMAFCAIE SCGKCTPCRI GSTRGVEVID RIVTNHHQPA VREQQVKLLR
DLCDTMVSGS LCAMGGMTPY PVLSALNHFP ADFGLAADQR SAA
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