| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2719 |
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| Symbol | |
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| ID | 6160896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2997834 |
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| End bp | 2999183 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665496 |
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| Product | histidine kinase |
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| Protein accession | YP_001791749 |
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| Protein GI | 171059400 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00103383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTGGC GGGTGGCGTT GCCGGCCGGC CTTGGCGCCC TGCTGCTGGT GATGGCCGCC
AACGGCCTGG CGACGGCGTT CGGGGTGTCG GCCGGGGTGT CGGTTCTGCT GGCGCTGGTG
GCCTGCGGGT GCGTGGGGGT GGCGGCGGCC GGCTGGTCCG GGCTGCAGTC CGACGCCCGC
AAGCAAGCGC CTGAAGCGAT CGCCACCAGC CGCCCGGCCC CGCCGGTCGA CCTGATCGCC
GCCGACTGGG AACGCGCCCT GCTCGCCCGC CTGCCCGGCC TGAGCTTCAT CGTGCAGCGT
GTCACCGAAG GCGAGCTGAC CGACTGGCTG CTGCTGGCCG GCCACGGCCA GGCCGAAGCC
GGCCAGGCGC AGGCCGACAC CGCCATCCCG GCCCCCGAGC TGCTGAGCCA CTGGCTCGCG
CGCCATCCGC AATGTCCGCC CGCCGAGGTG GTCGCGGCGC TGCAGGCGGC GGGCGACACC
GCCACGCCCC CCGGCGCCGA CCCGCGGCCC TGGCGCGTGC TGCCGCTGGG CGTGCGGCAC
AGCGTGCTGT GGCAGCCCCC GACCGCCAAG GCTGCGCCGG TTCCCCCTGC TCCCGCACCG
GCTCCTGTTC CAGCGCCTGC CCCCGCGTCC GTCCCGGCGC CGGCGAAGCC ACCCGAGAAC
GACCGCGAAT CGATCGCCTA CACGGTGTCG CACGACCTGC GCGCGCCGAT CCGCGTGATC
GAGGGTTTCA CGCGCATCGT GCGCGAGGAC TACGGCCACC TGCTCGACCG CATCGGCAAC
GACCACCTCG ACCGCGTGCT CGGCGCCGCC ACCCGCATGA ACACCATGAT CGACGCGCTG
CTGGCGCTGT CGCGGCTGTC GAACCAGCCG CTGGTGCGCG AGGCGGTACC GCTGTCGCAG
CTGGCCACGC AGATCATCGA GGAGCTGCGC GCCCAGGCGC CCGGCCGGGT GGTGCAAGCC
AGCATCGAGC CGGATCTGAC GGCACAGGGC GACCCGGCGC AGCTGCGCAC CGTGCTCGAG
AACCTGCTCG GCAACGCCTG GAAATACTCC GCCCGGCGCG CCGAGGGCCG GATCGAGTTC
GGCCTGACGC GGCTGAGTGC GGTGCGCGCC GACGTCGACG CGGCGCAGGA TCGCCCGGTC
TACTTCGTGC GCGACAACGG CGCCGGTTTC GACATGCGGT TCGCCGAGCG TCTGTTCGGC
GCCTTCCAGC GCCTGCACAG CGCCAGCGAG TTCACCGGCA CCGGCGTCGG CCTGGCCTCG
GTGCGGCGCA TCATCAACCG CCACGGCGGC GAGGTCTGGG CCCAGTCCAA GGTCGACGAG
GGCGCCAGCT TCTACTTCAC GCTCGGCTGA
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| Protein sequence | MAWRVALPAG LGALLLVMAA NGLATAFGVS AGVSVLLALV ACGCVGVAAA GWSGLQSDAR
KQAPEAIATS RPAPPVDLIA ADWERALLAR LPGLSFIVQR VTEGELTDWL LLAGHGQAEA
GQAQADTAIP APELLSHWLA RHPQCPPAEV VAALQAAGDT ATPPGADPRP WRVLPLGVRH
SVLWQPPTAK AAPVPPAPAP APVPAPAPAS VPAPAKPPEN DRESIAYTVS HDLRAPIRVI
EGFTRIVRED YGHLLDRIGN DHLDRVLGAA TRMNTMIDAL LALSRLSNQP LVREAVPLSQ
LATQIIEELR AQAPGRVVQA SIEPDLTAQG DPAQLRTVLE NLLGNAWKYS ARRAEGRIEF
GLTRLSAVRA DVDAAQDRPV YFVRDNGAGF DMRFAERLFG AFQRLHSASE FTGTGVGLAS
VRRIINRHGG EVWAQSKVDE GASFYFTLG
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