Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2715 |
Symbol | |
ID | 6160892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2987983 |
End bp | 2989377 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665492 |
Product | undecaprenyl-phosphate glucose phosphotransferase |
Protein accession | YP_001791745 |
Protein GI | 171059396 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0190611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTC AACGCACGTC ACCCGGTTTC AACGCCTCGG CGCCCCAGTC GGTGCCGGTC TTCGTTGCCG CCATCGCGGA GCCGCTGCTC GCCGTCTCGA CCTTCCTGGC CGTGACGGTG CTGCATGACG AGCCGGTCAA CCGCGCCGTG ATGATCCTGT GCATCCTGAT GCTGGTGCTG GTGTTTCCCG GCACCAACCG CTTCTACGAG CGGCCGCTCA ACTCCGCGGT CGACATCGTC TCGGCCTGGG TGGTGGTGCT GCTGATCCTC GGCCTGTGCG GCTACGCCAC CGACAGCCTC AAGTTCTTCG AGCCGTCGGT GCTGCTGTGG TGGGCCGCCA TCACGCCGCT GGCCCAGTTC GCCTGCGTGA TGATCGGCCG CAGCCTGATG CGCAGTCACG CCGCGCAGCC CGAATCGCGC CGACCCGCGC TGGTGATCGG TGCCGGCGCG CTGGGCGTCA AGGTGGCCCA GGCGCTCGGC AGCCGGCACT CCTACGGACA TGATTTCATC GGCTACGTCG AGGATCGCCA GCCCGAGCGT CGCCATCCGG AAGCCGCCGA CCGGGTGGTC GCACGCTTCG ACGAGATCGT CGACTGCATC GCCCGCCACC GCATCAAGGA CGTCTACATC ACGCTGCCGC TGAGCTCGCA GCCGCGCATC ATGCGCCTGC TCACGGCGCT GCAGGACACG GCGGTGTCGA TCTACTTCGT GCCCGACGTG TTCGGTGTCA ACGTGATCCA GGGCCGCATG CGCAACATGG ACGGCGTGCC GATCGTCAGC CTGCTCGAGA GCCCGTTCGT CGGCATCAAC GGCCTGGCCA AGCGCGCCAG CGACATCGTG CTGGCCAGCC TGATCCTGCT GCTGGTGTCG CCGCTGTTCG TGGCGATCGC CATCGGCGTC AAGCTCAGCT CGCCGGGGCC GGTGATCTTC AGGCAGCGCC GCAACGGCCT CGACGGCGAC GAGATCGTGG TCTACAAGTT CCGCTCGATG CGCGCCATGG ACAACGGCCG GGTGGTGCGC CAGGCCACCC GCGACGATCC GCGCATCACG CCCTTCGGCG CCTTCTTGCG CCGCACCTCG CTCGACGAGC TGCCGCAGTT CATCAACGTG CTGCAGGGCC GCATGAGCAT CGTCGGCCCG CGCCCGCATG CGGTGGCGCA CAACGACGAG TACCGGCCGA TCATCCGTTC GTACATGATC CGCCACAAGG TCAAGCCCGG CATCACCGGC TGGGCCCAGG TCAACGGCTG CCGCGGCGAG ACCGATGTGG TCGAGAAGAT GGCCGCCCGC GTCGAGTACG ACATCGCCTA TCTGCGCACC TGGTCGATCG GCATGGATCT GCGCATCATC GCGCGCACGA TCAAGCTGGT TTTCTTCGAC CGCAACGCGT TCTGA
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Protein sequence | MHAQRTSPGF NASAPQSVPV FVAAIAEPLL AVSTFLAVTV LHDEPVNRAV MILCILMLVL VFPGTNRFYE RPLNSAVDIV SAWVVVLLIL GLCGYATDSL KFFEPSVLLW WAAITPLAQF ACVMIGRSLM RSHAAQPESR RPALVIGAGA LGVKVAQALG SRHSYGHDFI GYVEDRQPER RHPEAADRVV ARFDEIVDCI ARHRIKDVYI TLPLSSQPRI MRLLTALQDT AVSIYFVPDV FGVNVIQGRM RNMDGVPIVS LLESPFVGIN GLAKRASDIV LASLILLLVS PLFVAIAIGV KLSSPGPVIF RQRRNGLDGD EIVVYKFRSM RAMDNGRVVR QATRDDPRIT PFGAFLRRTS LDELPQFINV LQGRMSIVGP RPHAVAHNDE YRPIIRSYMI RHKVKPGITG WAQVNGCRGE TDVVEKMAAR VEYDIAYLRT WSIGMDLRII ARTIKLVFFD RNAF
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