| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2705 |
|---|
| Symbol | |
|---|
| ID | 6162325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2976507 |
|---|
| End bp | 2976869 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641665482 |
|---|
| Product | succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| Protein accession | YP_001791735 |
|---|
| Protein GI | 171059386 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
|---|
| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0561791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA ACTACGGATC CAAGCGCATC GTCGTCGGTG CGCACTACGG CCTTCGCGAC
TGGCTGGCCC AGCGTGTCAC CGCCGTGCTG ATGGCGCTGT TCACCGTGGC CCTGCTGCTG
CAGGTGCTGT TCGGCGGCCC CATCGGCTAC GAGCGCTGGT CAGGCATCTT CTCGCAGCAG
TGGATGAAGG TGCTGACCTT CGTGCTGATC ATCTCTCTCG CCTGGCACGC CTGGGTGGGC
ATGCGTGACA TCTGGATGGA CTACATCAAG CCCGTCGGTC TGCGGCTGTC GCTGCAGGTG
TTCACGCTCG TGTGGCTCGT CGGCACTGCC GGCTGGGCGA TCCAAGTTCT CTGGAGACTC
TGA
|
|---|
| Protein sequence | MSQNYGSKRI VVGAHYGLRD WLAQRVTAVL MALFTVALLL QVLFGGPIGY ERWSGIFSQQ
WMKVLTFVLI ISLAWHAWVG MRDIWMDYIK PVGLRLSLQV FTLVWLVGTA GWAIQVLWRL
|
|---|
| |