| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2643 |
|---|
| Symbol | |
|---|
| ID | 6160922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2904258 |
|---|
| End bp | 2904791 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641665419 |
|---|
| Product | putative FkbP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001791673 |
|---|
| Protein GI | 171059324 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTT CAGAACCCTG TGTCGTCAGC CTGACCTGGC GCCTTGAAGA TGCCCAAGGG
CAACTGATCG ACGAACTGGT CGAGCCGGTC GAGTTCTTCT ACGGCGGCGA CGACCTGTTC
GCCAAGGTCG AAGAGGTCAT CAACGGCGAA GGTGCCGGCT TCGAGGCCAC GCTGCACCTG
GAGCCCGAAC ACGCGTTCGG CGAGTACCAC GCCGAGCTGG TGTGCTTCGA GGAACGCCGC
CTGTTCCCCG ACGGCATCGC GCCGGGCATG CAGTTCGAGG GCCTGCCCGA AGGCAGCCAG
ACGCCCGACA TGCCGAGCGC GGTGATCTAC ACCATCACCG AGGTCTACGA CAGCCATGTC
GTGCTCGACG GCAACCACCC GCTGGCCGGC GTCGCGCTGG TGCTGCAGCT GCAGGTGACG
GACGTGCGCG AAGCCGACGA AGAAGAGATC CTGCGCCGCA GCGTCGACAA CGACGCCACC
GGCCTGCTCA GCCTGGCGCC GGTCATGGCG ACCGACAACC AGACGATGCA CTGA
|
|---|
| Protein sequence | MRISEPCVVS LTWRLEDAQG QLIDELVEPV EFFYGGDDLF AKVEEVINGE GAGFEATLHL
EPEHAFGEYH AELVCFEERR LFPDGIAPGM QFEGLPEGSQ TPDMPSAVIY TITEVYDSHV
VLDGNHPLAG VALVLQLQVT DVREADEEEI LRRSVDNDAT GLLSLAPVMA TDNQTMH
|
|---|
| |