Gene Lcho_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2636 
Symbol 
ID6160974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2897352 
End bp2898074 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID641665412 
Producthypothetical protein 
Protein accessionYP_001791666 
Protein GI171059317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC TTTCCCTGCG CTGCGCCGCC GCGCTCACCG TGCTGGCCGC CACCTCCGCC 
CACGCCGCCG ACATCACCAA CGTCGGCGCA CTCAACCAGA CCCAGTTCCG CGCGCTGAGC 
GAAGACCTGG GCGCCGCGGT GTCCTATAAG CCGCTGGTGC CGGCCGAAAC CCTCGGCCTG 
ATCGGCTTCG ACATCGGCCT GGCCGTCACC GGCACCTCGC TCGAGCACCG CGACGTGCTG 
TCGCTGGCCG CCGGCGGCTC GACCGTGCCC AAGACCCTGC CGCTGGTCTC GGCGCGTGCG 
GTCAAGGGCC TGCCGTTCAA CTTCGACATC GGCGTGGCCC TCGGCGCCGT GCCCGACAGC 
AATGTGCGCA CCACCGGCGG CGAACTGCGC TGGGCCTTCG TCGACGGCGG CATGCTGATG 
CCGGCGATCG CCGTGCGTGG CGCGATCAGC CGGCTGTCGG GCGTCGACCA GCTCAAGGTC 
AGCACCAGCA GCATCGACGT GTCGATCTCG AAGGGTTTCC TGATGTTCAC GCCCTACGCC 
GGCGTCGGCA CGGTCAACAT CAAGACCGAC GCGCCCGGCA CCGGACTGGC CAAGGAAAGC 
TTCAGCAAGA GCAAGGTGTT CGCGGGCATC AACATCAACC TCGGCCTGCT CAACCTGGCC 
GCCGAAACCG ACAAGACCGG CGACAACACC AGCTACGGCC TGAAGGCCGG TTTCCGGTTC 
TGA
 
Protein sequence
MKLLSLRCAA ALTVLAATSA HAADITNVGA LNQTQFRALS EDLGAAVSYK PLVPAETLGL 
IGFDIGLAVT GTSLEHRDVL SLAAGGSTVP KTLPLVSARA VKGLPFNFDI GVALGAVPDS 
NVRTTGGELR WAFVDGGMLM PAIAVRGAIS RLSGVDQLKV STSSIDVSIS KGFLMFTPYA 
GVGTVNIKTD APGTGLAKES FSKSKVFAGI NINLGLLNLA AETDKTGDNT SYGLKAGFRF