| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2623 |
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| Symbol | |
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| ID | 6162995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2873350 |
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| End bp | 2874909 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665399 |
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| Product | histidine kinase |
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| Protein accession | YP_001791653 |
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| Protein GI | 171059304 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGC CTGTACGCGC CTGGTCGCTC CAGCACGGCC TGCAGTGGCG TGTGCTCGGT
GCCGTGCTGG TCCTGTGGCT GGGTGTCGCC AGTTATGCCT GGTACAACCT GAGCCAGCAG
GTCGACGATC TGCTGGATGG CCATCTGGCC CAGGGCATGG CGCTGCTGAT GGCGCTGCAG
GTGCAGGACC ACGAGTTCGA CGAGATGCTC GGCGTCGATC ACATCACGAC CCCTGACCAC
GCGCCGCCCG GTGCGCCACC CAGCTGGTCC GGCAGCACGG ATGCCGAACT CGCGCTGCAT
CGCTACGCCA CCAAGGCGGT CTTCCAGGTC TGGTATCAGG GTCAGCTGCT GCTGCGTTCG
TCCGATGCGC CCAACGAGCC GCTGGCCGAG CTCAAGCCCG GCTTTTCGGA CACCGTCGTC
AAGGGCGTGG CCTGGCGGGT CTACACCGCC CCGGCGATCC GGCCCGATTC CTACGTGATC
ATGGGCGAGT CGCGCGAGGC GCGCGTGGAG ATCATGAGTT CCATCCTGCG CGACACTTGG
GTGCCGATGC TCGCCGGGCT GCCGCTGGTC GCGCTGGCGA TCTGGCTGGC GGTGCGCCAG
GGGCTGGTTC CGGTGGTTCG ATTGGGATCT CAAGTGAGCG CTCGCAAACC TGATGCACTC
GATCCGATCG CCATCGAGGA CTCGCCGCGC GAGCTGGCGC CGCTGATCGC GGCGCTGAAC
CAGCTCTTCA TCCGCATGGA AAGTTCGCTC GAATCCGAGC GCCGCTTCAC CTCCGATGCG
GCGCACGAAC TGCGCACGCC GATCGCGGGC ATCCGGGCGC AGGCGCAGGC CGCACTCGAG
GTGTCCGATG ACGCGCAGCG CCGCCAGGCC CTGCACGGCA CGCTCGCCGG CTGCGACCAC
GCAGCCCACC TGGTCGACCA GCTGCTGCAG CTGGCCCGGC TCGAAGGCGC GCGGGCGCCG
AACACGCCGT CCAAGGTGAG CGACGTGCTG GTGGTGGCGC GCGAAGAAGT CGTCGAACTG
GCCAGCAAGG CGTTCGAGTC CGGTCATGAG CTGGTGCTCG AAACCGGTGA CCTGCCCGGG
TCCTGGCTGA TGGCGGCCGA CCCGGTGCTT GTCAGCGCAC TGCTGCGCAA CCTGATCGAC
AACGCCTTGC GCTACAGCCC GCCGATGTCG ACCGTCCAGG TCACGTTCGA GGCTGTCGAT
GCGCAGGGCC GGCTGTGGGT CAGCGTCGAG GACAGCGGAC CGGGTCTGTC ACCGCCCCTG
CTGCAGCGCC TGGGCGAGCG GTTTTTCAGG GCGCGCCTGA ACGACGCGTC AGGCAGCGGC
CTGGGCTGGT CGATCGTGCG CCGGATCGCG GCGGCACTGG ATCTGGTGGT GCAGGTCGAC
CGTTCGCCGA CGCTCGGCGG TTTGCGGGTG CGAATCGGCT GGATGCCGGC GAGCGCGCCG
GCACGGCCTC AGGGCTGTGC GCCCGTCACC GGTGCCGACG CACCGGCTGC CGCCGGTGCG
CTGGCCGCGC CCGGTGACGC GACGCTGCGC ACGTTGGCCA CGAACCGCCA GTCGCCGTAG
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| Protein sequence | MHKPVRAWSL QHGLQWRVLG AVLVLWLGVA SYAWYNLSQQ VDDLLDGHLA QGMALLMALQ
VQDHEFDEML GVDHITTPDH APPGAPPSWS GSTDAELALH RYATKAVFQV WYQGQLLLRS
SDAPNEPLAE LKPGFSDTVV KGVAWRVYTA PAIRPDSYVI MGESREARVE IMSSILRDTW
VPMLAGLPLV ALAIWLAVRQ GLVPVVRLGS QVSARKPDAL DPIAIEDSPR ELAPLIAALN
QLFIRMESSL ESERRFTSDA AHELRTPIAG IRAQAQAALE VSDDAQRRQA LHGTLAGCDH
AAHLVDQLLQ LARLEGARAP NTPSKVSDVL VVAREEVVEL ASKAFESGHE LVLETGDLPG
SWLMAADPVL VSALLRNLID NALRYSPPMS TVQVTFEAVD AQGRLWVSVE DSGPGLSPPL
LQRLGERFFR ARLNDASGSG LGWSIVRRIA AALDLVVQVD RSPTLGGLRV RIGWMPASAP
ARPQGCAPVT GADAPAAAGA LAAPGDATLR TLATNRQSP
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