| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2603 |
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| Symbol | |
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| ID | 6162892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2848924 |
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| End bp | 2850177 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665379 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001791633 |
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| Protein GI | 171059284 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.767969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG AACCACGCGA GGGCGCGCTG CCCTCGACGC CTGAGGCCGT GCATCCGATC
CAGCGCCCGG TGCGGGTGTT GCGGGTGCAG CACGAAACCC GCTACGACTA CGACGGGCCG
GTCGAGCTCG CGCATCACAT GGCGCATCTG CGTCCGCGCA TGACGCCCTG GCAGCGCATC
CGCGACTGGT CGCTGCGCAT CAATCCGTGG CCCGACGCCG TGGTGTGGGA TGCGCCCACG
CCACTCGATC TGCCGCTGAC CGAGCCGCTG CCCGGCGCCG AAACGGCCGC GCAGGCCGAC
TCCGATGTGG CGGTGTCCGT GCGCTCGCAC CCGGATGGCG CGCTGCGGTC CTATCCCGGT
GCCGACATGG CGCCGGGGGT GCAGCAGAGC CAGGATCCGT GGGGCAACTG GCGCGCGGTG
TTCTCGCATT CGCGGGTGCA TCGGCGCCTG ACCGTGCGGG CCTGTTTCAC GGCCGAACTG
CTGGCGCCGC CGCCGATGCG GCTCAAGGCC AGCCCGCCCT GGGAGCAGGT GGCCCGGCGC
CTGCGCTATC AGCCCGGCCA GCCGTTCGAC GAGGCGCTCG AGTTCGTGCT GCCGTCGACC
TACGCCCCGC GCGACGCGGC GCTGGCGCGG CTGGGCGCCG AGGTGTTCCT GCCCGGCACG
CCGTTGCTGG CCGGTGCGGT CGCGCTCATG CACCTGGTCT ACCGGCGCTT CGAATACCAC
ACCACCGCGA CCTCGGTGGC CACCCGCGCA CCCGAGGCCC TGGCGCAGCG GCGCGGCGTC
TGCCAGGACT TCGCCCACGT GATGATCGGT GCGCTGCGCT CGCTGGGCCT GGCGGCGCGC
TACGTCAGCG GCTATCTGCT GACCCAGCCG CCACCCGGCC AGCCGCGGCT GGTGGGGGCC
GACGCCTCGC ATGCCTGGGT GCAGGTGTGG TGCCCGGTGC ACGGCTGGGT CGCGCTCGAC
CCGACCAATG CGGTGCCGGC AGGGCTCGAT CACGTCACGC TCGCCTGGGG CCGCGACTAC
GCCGATGTCG CGCCGTTGCG GGGCGTGATC CGCGGCGGCG GCGGCCCGGA GCCGCGGGTG
TCGGTCACGG TGGAGCCGCT CACCGAGCCC GAGGAGGCCG GTCGGTCGAT CGAAGCCAGG
TCCGACGCCG TCGAACCGGC CGAGGCCACC GCTGCCGACA CTGCCGATGC CGAAGCAGAT
GCCGAGCCGG CCGATGCGGC CGATGCGGCC GACGCCACCG GCTCGGCCGC CTGA
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| Protein sequence | MSAEPREGAL PSTPEAVHPI QRPVRVLRVQ HETRYDYDGP VELAHHMAHL RPRMTPWQRI
RDWSLRINPW PDAVVWDAPT PLDLPLTEPL PGAETAAQAD SDVAVSVRSH PDGALRSYPG
ADMAPGVQQS QDPWGNWRAV FSHSRVHRRL TVRACFTAEL LAPPPMRLKA SPPWEQVARR
LRYQPGQPFD EALEFVLPST YAPRDAALAR LGAEVFLPGT PLLAGAVALM HLVYRRFEYH
TTATSVATRA PEALAQRRGV CQDFAHVMIG ALRSLGLAAR YVSGYLLTQP PPGQPRLVGA
DASHAWVQVW CPVHGWVALD PTNAVPAGLD HVTLAWGRDY ADVAPLRGVI RGGGGPEPRV
SVTVEPLTEP EEAGRSIEAR SDAVEPAEAT AADTADAEAD AEPADAADAA DATGSAA
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