Gene Lcho_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2551 
Symbol 
ID6163536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2784828 
End bp2785409 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID641665326 
Productsuperoxide dismutase 
Protein accessionYP_001791581 
Protein GI171059232 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00182176 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACACA CGCTGCCCGC CCTGCCTTAC GCGATCGACG CCCTGGCGCC GTTCATCTCG 
AAGGAAACCT TCGAATACCA CCACGGCAAG CACCATCAGG CCTACGTCAC CAACCTGAAC 
AACCTGATCG GCGGCACCGA GTTCGCCGGT CTGGCGCTCG AAGAGATCGT CAAGAAGGCC 
AGCGGCCCGG TCTACAACAA CGCCGCCCAG GTCTGGAACC ACACCTTCTT CTGGAACTGC 
ATGAAGCCCG CCGGCGGCGC CGCGCCGACC GGTGCGCTGG CCGCGGCCAT CGATGCCAAG 
TGGGGCAGCT ACGCCGCCTT CAAGGAAGCC TTCACCAAGA GCGCCGTGGG CAACTTCGGT 
TCGGGCTGGA CCTGGCTGGT GAAGAAGGCC GACGGCTCGG TCGACATCGT CAACACCGGC 
GCCGCCGGCA CCCCGCTGAC CACCGCCGAC AAGGCGCTGC TGACGATCGA CGTGTGGGAA 
CACGCCTACT ACATCGACTA TCGCAATGCG CGTCCTAAGT TCGTCGAGGC CTTCCTGAAC 
AACCTGGTGA ACTGGTCGTT CGCGGAAGCC AACTTCGCGT GA
 
Protein sequence
MEHTLPALPY AIDALAPFIS KETFEYHHGK HHQAYVTNLN NLIGGTEFAG LALEEIVKKA 
SGPVYNNAAQ VWNHTFFWNC MKPAGGAAPT GALAAAIDAK WGSYAAFKEA FTKSAVGNFG 
SGWTWLVKKA DGSVDIVNTG AAGTPLTTAD KALLTIDVWE HAYYIDYRNA RPKFVEAFLN 
NLVNWSFAEA NFA