| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2523 |
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| Symbol | |
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| ID | 6161488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2753100 |
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| End bp | 2754101 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665293 |
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| Product | import inner membrane translocase subunit Tim44 |
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| Protein accession | YP_001791553 |
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| Protein GI | 171059204 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0253878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT GGTTGCTGGC TGCCCTGATG GCGCTGGTTG CAGTCACCAC CACGCTGCCT
GCCGACGTCG AGGCCAAGCG CCTCGGCAGC GGCGGCTCTG CAGGCATGCA GCGCAGCATG
CCCGCACGCA ATGACAGCGC AGCAACGCCC GCCAAGCCGG CGCCTGCCGC GCAGCCGGGC
CAGCAAGCCG GTCAACAGGC CGGTGCCGCA CCGGCTGCAG CGCCCAAGCG CAACTGGATG
GGACCGATCG CCGGCCTTGC CGCCGGTCTC GGCATCGCCG CGCTGATGAG CCATCTGGGC
CTGGGCGAAG CGTTCGGCAA CTTCCTGATG ATGGCGTTGC TGGCGGTCGC CGCGATCGCG
CTGGTGGCCT TCCTGATGCG CCGCTTCGGC AGCAAGGGCA AGACGGCCCC GGCTGCAGGC
GACTGGGCGC CGGCGGGTGC CGGCGCCGCA GGCAGCAGCG CCGGCAGCGG CGCGCAGGTT
GCCTGGCCGG CCGCGATGCA GCGCAGCAAT GCGCAAGAAG GCAGCGCGGC AGCAAGCTTT
GGCCAGGCCG GCAACTCGGC CGGATTCAAT TCGGCTTCCG CCCCGGCCTT CGAGCCCATC
GGGGCAGCGC CGACCGCCGC CGCCAACCTG CCGGCCGACT TCGACCAGGC TGGTTTCGAA
CGCATCGCCA AGATGATCTT CATCCGCATG CAGGCGGCCA ACGACAGCGG TGACCTGAAC
GACCTGCGCA GCTTCACGAC GCCGGAGATG TTCGCCCACA TCCGCCTTGA ACTGCAGGAG
CGTGGCAACG CCCCGCAGAC CACCGACGTG GTCGACGTGG CAGCCGAAGT GCTCGACCTG
ACCCGTGACA CGGATCGCGA CATTGTCAGC GTGCGCTACC ACGGCCAGAT CCGTGAAGCG
GCGGGCGCGC CGGTGACATC GTTCGACGAG ATCTGGCACC TGGTGCAGCC GCGTGACGGC
AGCCGCAACT GGGCGATCTC GGGGATCCAG CAAACGAACT GA
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| Protein sequence | MKNWLLAALM ALVAVTTTLP ADVEAKRLGS GGSAGMQRSM PARNDSAATP AKPAPAAQPG
QQAGQQAGAA PAAAPKRNWM GPIAGLAAGL GIAALMSHLG LGEAFGNFLM MALLAVAAIA
LVAFLMRRFG SKGKTAPAAG DWAPAGAGAA GSSAGSGAQV AWPAAMQRSN AQEGSAAASF
GQAGNSAGFN SASAPAFEPI GAAPTAAANL PADFDQAGFE RIAKMIFIRM QAANDSGDLN
DLRSFTTPEM FAHIRLELQE RGNAPQTTDV VDVAAEVLDL TRDTDRDIVS VRYHGQIREA
AGAPVTSFDE IWHLVQPRDG SRNWAISGIQ QTN
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