Gene Lcho_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2512 
Symbol 
ID6161465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2740388 
End bp2740891 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID641665282 
Productthioesterase superfamily protein 
Protein accessionYP_001791542 
Protein GI171059193 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00440997 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTGC CCGCCCACCA ATTGACGATG ACGGTGCTGA TGACACCCGA CACCGCCAAC 
TTCGCCGGCA ACGTGCATGG CGGCACCATC CTCAAGCTGC TCGACCAGGT GGCCTACGCC 
TGCGCCAGCC GCTACGCCGG GCGCTACGTG GTGACGTTGA GCGTCGACCA GGTGATGTTC 
CGCCAGTCGG TGCACGTGGG CGATCTGGTG AGCTTTCTGG CCAGCGTCAA CTACACCGGC 
ACCTCGTCGA TGGAGATCGG CATCAAGGTG ATCGCCGAGA ACATCCGCAC CCAGGAGAAG 
CGCCACGTCA ACAGCTGCTT CTTCACGATG GTGGCGGTGG ACGACGACCG CAAGCCGGTG 
GCGGTGCCGG CGCTGCGGCC GTTTTCGCCC GACGAGCGGC GCCGCTACGC CGCCGCCGAG 
TTGCGCAAGC AGCTGCGCCA GGAGTTCGCG CTGCGCTTCG AGGCGGTGCG TTCGTCGGCG 
CCGGCGCTCG GCAGCGATCT CTGA
 
Protein sequence
MDLPAHQLTM TVLMTPDTAN FAGNVHGGTI LKLLDQVAYA CASRYAGRYV VTLSVDQVMF 
RQSVHVGDLV SFLASVNYTG TSSMEIGIKV IAENIRTQEK RHVNSCFFTM VAVDDDRKPV 
AVPALRPFSP DERRRYAAAE LRKQLRQEFA LRFEAVRSSA PALGSDL