Gene Lcho_2493 details

Gene Information

• Locus tag: Lcho_2493
• ID: 6160986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2716068
• End bp: 2716592
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641665263
• Product: NAD(P)H dehydrogenase (quinone)
• Protein accession: YP_001791523
• Protein GI: 171059174
• COG category: [R] General function prediction only
• COG ID: [COG0655] Multimeric flavodoxin WrbA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00000000345605
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGACCCGTA CGCTGCTGAT CGTCTACCAC TCGATGACCG GCGGGACCCG CCAGATGGCC 
GAAGCGGCCG CCGAGGCCGC CCGGTGCGAG GCGGCCGGCG CAGCCGACGA CAGCGCCGGC 
GTGCCGGTCG AGGTGCGGCT GCTGCACGCC AGCGCCGCCG GCCCGGCCGA CGTGCTGGCG 
GCGCACGGCT ACCTGTTCGC GACGCCGGAA AACCTCGCCG CGATCGCCGG GCTGATGAAG 
GATTTCTTCG ACCGCAGCTA CTACGGCGCG CTCGACCGCA TCAACGGGCG ACCCTACGCC 
AGCCTGATCT GCGCCGGCAG CGACGGCCGC AACGCGGCCC GCCAGATCGA ACGCGTCGCC 
ACCGGCTGGC GGCTGGTCGC GGTGGCCGAG CCGCTGATCG TCTGCACCCA TGCGCAGACC 
CCCGAGCAGA TCCTGCAGAC CCAGCAGATC GCCGCGGCGG ATCTGCAGCG CTGCGCGGAG 
CTGGGCGCGG CGATGGCGGC CGGGCTGGCG CTCGGGGTGT ACTGA 

 

Protein sequence

MTRTLLIVYH SMTGGTRQMA EAAAEAARCE AAGAADDSAG VPVEVRLLHA SAAGPADVLA 
AHGYLFATPE NLAAIAGLMK DFFDRSYYGA LDRINGRPYA SLICAGSDGR NAARQIERVA 
TGWRLVAVAE PLIVCTHAQT PEQILQTQQI AAADLQRCAE LGAAMAAGLA LGVY