Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2487 |
Symbol | |
ID | 6160649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2709913 |
End bp | 2710899 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641665257 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_001791517 |
Protein GI | 171059168 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000000110563 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCATCC AGTGGTTTCC GGGTCACATG AACTCGACCA AGAAAGCCAT CGCCGAGCGA CTGCCGGAAA TCGACGTGGT GATCGAGCTG CTCGACGCGC GCCTGCCCGG CTCGAGCGCC AACCCGCTGC TGGCCGACCT GACACGCGGC AAGCCGGCGC TCAAGGTGCT CAACAAGCAG GACCTGGCCG ACCCGGCGCG CACCGCGCTG TGGCTGGCCC ATTACCAGGC GCGGCCCGGC ACGAACGCGA TCGGCCTCGA TGCCAGCGTC ACCGCGCCGG CCCGCCAGCT GATCGCGGCC TGCCGTGAGC TCGCACCGCT GCGCGGCGGC ATGGTCAAGC CGGTGCGGGT GCTGATCTGC GGCATCCCGA ACGTGGGCAA GTCGACGCTG ATCAACACCC TGCTCGGCCA GCGCTCGGCC AAGACCGGTG ACGAGCCCGG CATCACCAAG GTCGAACAGC GCCTCACGCT GGCGAGCGAT TTCTACCTGT ACGACACGCC CGGCATGCTG TGGCCGCGCA TCACGGTCGA GCAGAGCGGC TACCACCTCG CGGCCAGCGG CGGCATCGGC CGCAATGCCT ACGACGAGGA AGAAGTGGCG CTCGACCTGC TGGCCCGCGT GCGCCCGCAC TACGCCGATC GGCTGCAGGC GCGCTACAAG CTGGCCGACC TGGCGGGCCT GAGCGACGAG GCCCTGCTGG CCGACATCGG CCGCAAGCGC GGCGGCCTGA TGGCCGGCGG CAAGGTCAAC CTGCAGAAGG CCGCCGAGGT CGTCATCACC GACTTCCGCA CCGGCACCTG GGGCCGCATC ACGCTGGAGA CGCCCGACGA GTTCATGCAG TGGCAGGCGG CCGGCCAGGT GCTCGATGCC CAGCGGCAGG CCCGGCGCGA TGCGCGCAAC CAGAAGAAGA TCCCGCAGCG CGACGCAGCA GCAGCAGCCG CGGCGGCGGC GATGAGTACC GACGCCGCGG ACGCGCAACC GGACTGA
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Protein sequence | MPIQWFPGHM NSTKKAIAER LPEIDVVIEL LDARLPGSSA NPLLADLTRG KPALKVLNKQ DLADPARTAL WLAHYQARPG TNAIGLDASV TAPARQLIAA CRELAPLRGG MVKPVRVLIC GIPNVGKSTL INTLLGQRSA KTGDEPGITK VEQRLTLASD FYLYDTPGML WPRITVEQSG YHLAASGGIG RNAYDEEEVA LDLLARVRPH YADRLQARYK LADLAGLSDE ALLADIGRKR GGLMAGGKVN LQKAAEVVIT DFRTGTWGRI TLETPDEFMQ WQAAGQVLDA QRQARRDARN QKKIPQRDAA AAAAAAAMST DAADAQPD
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