| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2476 |
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| Symbol | |
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| ID | 6160462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2696102 |
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| End bp | 2696827 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665246 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001791506 |
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| Protein GI | 171059157 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000027247 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCCC CCCGCCCCGA CCATGTGCTG GTGGTCGAAG ACGAGCCCCG CCTGGCCCGG
CTGGTCAGCG ACTACCTGGT CGCCGCCGGC TACACCACCC GCATCGTCGA CCACGGCCTC
GACGTGCTGC CGGCCGTGCG CCAGCACGCG CCCGACCTGA TCGTGCTCGA CCTGATGCTG
CCCGGCCGCG ACGGCCTGAG CCTCTGCCAG GAGCTGCGGC GGTTCAGCGA GGTGCCGGTC
ATCATGCTGA CGGCGCGGGT CGAGGAGGTC GACCGCCTGA TCGGCCTCGA AGCCGGCGCC
GACGACTACA TCTGCAAGCC CTTCAGCCCG CGCGAGGTGG TGGCGCGTGT CAAGGCCGTG
TTGCGCCGGC ACAAGCGCGT GCCGACCGAC TTGGTCGCCG CGCCATCGAG CCCGCTGGTG
ATCGACGAGG AGCGCCACCG CGCCCTGCTC GACGGCCACG AGCTCGACCT GACGCCGGTC
GAGTTTCGGC TGCTGAAGGC GCTGGCCGCC GCACCCGGCC GGGTCTTCTC GCGCGACCAG
CTGCTCGACA AGCTGCACGA CGACACCCGC GCGCTGAGCG ACCGCACCAT CGACAGCCAC
GTCAAGAACC TGCGCCGCAA GCTGGAGCAG GCGTGCCCGG GGCTGGAGCC GATCCGCTCG
ATCTACGGCG TGGGTTACCG GTTCGAGCTG GGTGACGACA CGCGTGCCTG GTCGAGCTCG
CCGTAG
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| Protein sequence | MNAPRPDHVL VVEDEPRLAR LVSDYLVAAG YTTRIVDHGL DVLPAVRQHA PDLIVLDLML
PGRDGLSLCQ ELRRFSEVPV IMLTARVEEV DRLIGLEAGA DDYICKPFSP REVVARVKAV
LRRHKRVPTD LVAAPSSPLV IDEERHRALL DGHELDLTPV EFRLLKALAA APGRVFSRDQ
LLDKLHDDTR ALSDRTIDSH VKNLRRKLEQ ACPGLEPIRS IYGVGYRFEL GDDTRAWSSS
P
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