Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2431 |
Symbol | |
ID | 6161012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2640456 |
End bp | 2641559 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641665201 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001791461 |
Protein GI | 171059112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.779457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC GACTGCAAAT AGGCATTGCC GGTGCCGGCG TGCTGGGCCG ACTGGCGGCC TGGGCGCTGG CCGAGGCCGG CCATCACGTG ACGGTGTTCG ACCCGGCCGA CGGCCCGGCG CCGCGCCAGG ACGGCCGCGG TGCCGCCGGC TACACCGCCG CGGGCATGTT GAGCCCGCTG GCCGAGCTCG ACAACGCCAG CGCCGAGGTG GCGTTGCTGG GCTGGCAGTC GATCGCGATC TGGTCGCGGG TGGCCGAACG ATTGACCGCC GCCCACGCAG GCAGCGAGCC CGCACCGCTG CTGTTTCGCC AGCTCGGCAG CCTGATGGTG GCGCACGGCA GCGACCTCGG CGCGGCCGAG CGCGTGCTGG CGCGGCTGCG TGGCGCGACC GATCTGCACG CGGCGATGCC ACAGGCGCAG GCGCTCGATC GCCCCGCGCT GCGCGAACTC GAGCCCGCGC TTGACCCGCA GTTGCGCGCC TGGCTGCTGC CCGGCGAGGG CCAGATCCTG CCCGCGCCAA TGCTGAGCGC GCTGGCGGCG TCGGCGCGTG GTGTCGACTG GCGCTGGGGC TGCAGCGCCG ACGAGGTGGC GCCCGGGCGC ATCACGCTGG CCGACGGCAC CTGGCACGAC TGCGACCAGG CACTCGACCT GCGCGGCCTG GGCGCCCGCC CCGCCCTGCC CCTGCGTGGC GTGCGCGGCG AGGTGGTCTG GCTGCACGCG CCCGGCGTGG CGCTGCAGCG GCCGGTGCGG CTGCTGCACC CGCGCCACCG GGTCTACATC GTGCCGCGGC CGGGGGATCT GTTCGTGGTC GGCGCCAGCG AGATCGAGAG CGAGGACCGC TCGCCCGTCA GCCTGCGCAG CGCGGTCGAG CTGATGGCCG CCGCGCACAG CGTGATCAGC GGCCTGGCGG AAGCGCGCAT CGTGCACCTC GAGACCAATC TGCGCCCGGC GCTGCCCGAC AACGAGCCGC GCATCGAAGC CGAGCCGGGC CTGCTGCGCA TCAACGGCCT GTTCCGCCAC GGCTGGCTGC TGGCGCCCGC GCTGCTGCGC GACGGCCTGC GGCGGGCCGG GCTGGTGAAT GCGTTGGAGA ATGGCGCCCC ATGA
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Protein sequence | MSQRLQIGIA GAGVLGRLAA WALAEAGHHV TVFDPADGPA PRQDGRGAAG YTAAGMLSPL AELDNASAEV ALLGWQSIAI WSRVAERLTA AHAGSEPAPL LFRQLGSLMV AHGSDLGAAE RVLARLRGAT DLHAAMPQAQ ALDRPALREL EPALDPQLRA WLLPGEGQIL PAPMLSALAA SARGVDWRWG CSADEVAPGR ITLADGTWHD CDQALDLRGL GARPALPLRG VRGEVVWLHA PGVALQRPVR LLHPRHRVYI VPRPGDLFVV GASEIESEDR SPVSLRSAVE LMAAAHSVIS GLAEARIVHL ETNLRPALPD NEPRIEAEPG LLRINGLFRH GWLLAPALLR DGLRRAGLVN ALENGAP
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