Gene Lcho_2429 details

Gene Information

• Locus tag: Lcho_2429
• ID: 6161010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 2637477
• End bp: 2638202
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641665199
• Product: hypothetical protein
• Protein accession: YP_001791459
• Protein GI: 171059110

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.322551
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAAAT CTGCTGCCCA GGCCGTTCCC CCGGCCGCTT CCCTGGCCGC ATTTCCAGGC 
GGCGTGCTCT CGTTGCGCCC GTGGACGCCG GCTGCGGCGT CGGCGCGAGG TCAGGCCAAG 
GCTGCGCCCG ACGAGACCGG CCGCTCCTAT CTGCTGCAGG TCCAGGGCGA GGCGATGTCG 
CAGTTGCTCG AAGCCGTGAT GCCGATGCTG GACCGCCTGC TGTTGCAGAA GACCGCCGAG 
GTCCGCGAGC GCAAGCTCGA GGAGATGGTC GACTTCATCA CCGGCCAGAT GGTGGTGCCC 
AGCCACGTCG ACACCCAGAT GGCGCAGCGG CTGGCGCAGC GGCATGCGCG GGTGCTCAAC 
GAGTTCGGCT ACGCCAGCGC CGAGCAGCTG GCCGAGGCCA ACCACTCGCG CGCGGCCAAC 
CGCAGCGCGC TGGCCGACAA CTGGAAGAAG CGCGGCCAGG TGTTCTCGGT GCGCCACCGC 
GATGAATCGG GGCGCTCGCG CGAGGTCTTC CCGCTGTTCC AGTTCGACGA TCACAAGCCG 
ATCAAGGCGG TGCAGGCCGT CATCGAGGCC TTCGGCGAAC ACAAGGCGGC GTGGAAGCTG 
GCGCTGTGGT TCACCTCGAA CAACGGCTGG CTGCCCGGCC AGGCCCGGCC GGTCGACCTG 
CTGGCGTCCG CCCCCGAGGC CGTCGTGCAG GCGGCCCGGC ACGATGCGGC CGGGAGCGCG 
GCTTGA 

 

Protein sequence

MAKSAAQAVP PAASLAAFPG GVLSLRPWTP AAASARGQAK AAPDETGRSY LLQVQGEAMS 
QLLEAVMPML DRLLLQKTAE VRERKLEEMV DFITGQMVVP SHVDTQMAQR LAQRHARVLN 
EFGYASAEQL AEANHSRAAN RSALADNWKK RGQVFSVRHR DESGRSREVF PLFQFDDHKP 
IKAVQAVIEA FGEHKAAWKL ALWFTSNNGW LPGQARPVDL LASAPEAVVQ AARHDAAGSA 
A