| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2422 |
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| Symbol | |
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| ID | 6164131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2629299 |
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| End bp | 2631395 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665192 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791452 |
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| Protein GI | 171059103 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria
[COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0403526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACA CGATCCCCTG CACCCTGATG CGCGCCGGCA CCTCCCGCGG CCCCTTCTTC
CTGCTCGATT CGCTGCCCGT CGACGAGACG GCGCGCGACG AGGCCCTGAT CGGCGCGATC
GGCGCTTCCG ACCTGCTGCA GGTCGACGGC CTGGGCGGCG GCAGCACGCT GACCAGCAAG
GTCGCGATCG TCTCGCGCTC GGCGCAGCCG GACTGCGACG TCGACTACCT GTTCGCGCAG
GTCGGTGTCG GCCAGCGTTC GGTCGACACC CGGCCCAACT GCGGCAACAT GCTCTCGGGC
GTGGGGCCGT TCGCGATCGA ACAAGGCCTG GTCGCGGCAC GCGACGGCGT CACCACGGTG
CGGGTCTTCA ACGTCAACAC CCGCTCGCGC ATCGAGGTAA CGGTGCAGAC GCCCGGCGGC
CAGGTGCGCT ACGACGGCGA CACCCGCATC GACGGCGTGG CCGGCACCGC GGCGCCGATC
GCACTGAACT TTCTCGACGC CTGGGGCGCG GTCACCGGCT CGGTGTTCCC GACCGGCCAG
CGCCAGGACG TGATCGACGG CGTGGCGGTG ACCTGCATCG ACGCGGCGAT GCCGCTGATG
ATCGTGCGCG CTGCCGACCT CGGATTCAGC GGCCGCGAGA GCCCCGCCAC CTTCGATGCC
GATGCCGCCT TCCTCGAGCG CCTGGAGCGG CTGCGCCGCA TCGCCGGCGA GCGCATGGGC
CTGGGCGACG TGTCGAACAG CGTGATCCCC AAGCCGGTGC TGGTGAGCGC GGGCGAGGAC
GCCTACAGCA TCACCTCGCG CTATTTCACG CCGCGGCGCT GCCATGCCTC GCACGCCGTC
ACCGGCGCCA TCGGCGTGGC CACGGCGCTG GCCCTGCCCG GCACGGTGGC CAGCAGCAGC
GCGGCGCTCG GCGGCGCGCA CCGGCTGACG GTGCTGCACC CGGCCGGGCG CATCGACATC
GAGGTGGCGA TCGACGGCAG CGGCGACAGC GCCCGCATCG TCACCGCCGC CCTGGTGCGC
ACCGCCCGCA AGATCATGCA GGGCGACCTG CACATCCCCG ACTACGTTTT TTCCCGACCC
GAACCGACTG CAGGAGACAC CATGAAGCAG ACCCCGACCC AGGCCAGACA GAGCCTTGCC
AAGACCCTGG CACCGATGAT CGCCGCCGCC ACGCTCGCCA CCGCGTCGGG CACGGCGCTG
GCATGGCCCG ACAAGACCAT CACGATCGTC GTGCCCACCG CGGCCGGCGG CGGCAACGAC
GCGATGGCGC GCACCATCGC CGCCAAGCTC GGGCCGCTGC TGGGCCAGAC CGTCATCATC
GACAACCGCG CCGGCGCCAA CGGCTCGATC GCCAGCGAAT ACGTTGCCCG CGCCACGCCC
GACGGCCACA CGCTGATGCT CGGCTACATC GCCACCCACA GCATGAACCC GGCGCTGCAG
AAGCTGCGCT ACGACCCGGT GAAGGATTTC GAGCCGGTCG GTCTGGTCGG CTATTCGCCC
ACGCTGATGG TGGCGCACGC CAGGACGCCG GTGAAGGACG TCAAGGACCT GGTGGCCCAG
CTCAAGGCCT CGCCCGACAA GTACACCTAC GCCTCGGCCG GCAACGGCAC GGCGCCGCAT
TTCGCGGCCG AGCTGTTCAA GCTGAACGCG GGCGTGACGA TGCTGGGCAT CCCGTACAAG
GGCTCGGCAC CGGCCGTGAC CGACACCATC GGCGGCACCA CGCAGTTCAT GTTCCCGAGC
CTGTACACGG CCTACCCGCA GGTCAAGGCC GGCAAGCTGC GTGCGCTGGC GGTCGCCGGC
CCGAAGCGCG TGCCCAGCCT GCCCGACGTG CCCACGCTCA AGGAAGCCGG CATCGACGGC
GTCGACGTGA CCCAGTGGTA CGCGCTCTTC GCCCCGGCCA AGACACCCAA GGCGGTCGTC
GACCAGCTCA ACAAGGCGCT CAACCAGGTG CTCAAGGACG CGGACACGAT CAAGCGCATC
GAGGACCACG GCGCCGACGT CGACACCAGC ACGCCCGAAC AGCTGCGCGC GATGGTCGAC
AGCGAGCTCG CCAAGTGGAA GTCGGTGGTC CAGAAGGCCA AGCTGACGGC CGATTGA
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| Protein sequence | MAHTIPCTLM RAGTSRGPFF LLDSLPVDET ARDEALIGAI GASDLLQVDG LGGGSTLTSK
VAIVSRSAQP DCDVDYLFAQ VGVGQRSVDT RPNCGNMLSG VGPFAIEQGL VAARDGVTTV
RVFNVNTRSR IEVTVQTPGG QVRYDGDTRI DGVAGTAAPI ALNFLDAWGA VTGSVFPTGQ
RQDVIDGVAV TCIDAAMPLM IVRAADLGFS GRESPATFDA DAAFLERLER LRRIAGERMG
LGDVSNSVIP KPVLVSAGED AYSITSRYFT PRRCHASHAV TGAIGVATAL ALPGTVASSS
AALGGAHRLT VLHPAGRIDI EVAIDGSGDS ARIVTAALVR TARKIMQGDL HIPDYVFSRP
EPTAGDTMKQ TPTQARQSLA KTLAPMIAAA TLATASGTAL AWPDKTITIV VPTAAGGGND
AMARTIAAKL GPLLGQTVII DNRAGANGSI ASEYVARATP DGHTLMLGYI ATHSMNPALQ
KLRYDPVKDF EPVGLVGYSP TLMVAHARTP VKDVKDLVAQ LKASPDKYTY ASAGNGTAPH
FAAELFKLNA GVTMLGIPYK GSAPAVTDTI GGTTQFMFPS LYTAYPQVKA GKLRALAVAG
PKRVPSLPDV PTLKEAGIDG VDVTQWYALF APAKTPKAVV DQLNKALNQV LKDADTIKRI
EDHGADVDTS TPEQLRAMVD SELAKWKSVV QKAKLTAD
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