Gene Lcho_2386 details

Gene Information

• Locus tag: Lcho_2386
• ID: 6159905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2592880
• End bp: 2593674
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641665156
• Product: SapC family protein
• Protein accession: YP_001791416
• Protein GI: 171059067

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCAGA CCAACAACAA CGACGCCACC GTCACCGCTG CCGCCGCGGC GCAGGCCGCA 
CCGGCGCGCT CGAACGGCAT CTACCGCAAC CTGGTCCTGC TGGACCGCAA GCGCCACGCC 
GGCAAGCGCG TCAAGCCGGT CAACGACTGG CTGTTTGCGC GTGACCTGAA CGCGGTGCCG 
CTGACCACCA TCGAGTTTGC CGAAGTGGCG CGCGAGTTCC CGATCGGCTT CATCCCCGCC 
CCGCCCGACG CCAATGGCAA GGCGCGTGTC GCGCCGGTGG TGATGCTGGG CCTGCGCGAG 
CGCCAGAACC TGGTGATCGG CGACGACGGC CGCTGGGGCG GCCGCAGCCT GCCGGCGGTG 
CTGCGCCGCT ATCCGTTTGC CTACGTGCGC ACGCAGCCCG AACAGCTCAG CCTGGTGATC 
GACGAAGCCT ACGAAGGCCT CAACGACAGC GAGGGCGAAC TGCTGCTCAC CGAGGCCGGC 
GAGCCGACCG ACTACCTGCA GTCGGTGATG CGTTTCCTCG ACCGTTTCGA GACCGAGCAG 
CAGCGCACCG AGGCGCTGTG CGAGCGCCTG GTGGCGCTCA ACCTGCTGCG CGGCGCCGAG 
ATCAAGGGCG AGCTGGCCAA CGGCGAGCAC ATCAACGCCA CCGGCTTCTT CATGGTCGAC 
GAGGAAAAGC TCGCCAAGCT GCCCGACGCC GACGTGCTGG CCCTGCACCG CAGCGGCGCC 
CTCGCCCTGC TGCACGCGCA TCTGGTGTCG ATGGGCCAGT TCAACGCACT GGCGCAGCGC 
CTGGGCGCAC GCTGA 

 

Protein sequence

MTQTNNNDAT VTAAAAAQAA PARSNGIYRN LVLLDRKRHA GKRVKPVNDW LFARDLNAVP 
LTTIEFAEVA REFPIGFIPA PPDANGKARV APVVMLGLRE RQNLVIGDDG RWGGRSLPAV 
LRRYPFAYVR TQPEQLSLVI DEAYEGLNDS EGELLLTEAG EPTDYLQSVM RFLDRFETEQ 
QRTEALCERL VALNLLRGAE IKGELANGEH INATGFFMVD EEKLAKLPDA DVLALHRSGA 
LALLHAHLVS MGQFNALAQR LGAR