| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2366 |
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| Symbol | |
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| ID | 6159754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2570116 |
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| End bp | 2571534 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665135 |
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| Product | chain length determinant protein EpsF |
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| Protein accession | YP_001791396 |
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| Protein GI | 171059047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03017] chain length determinant protein EpsF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCT CCCAGTTCCT CTCGATCCTC AAGGCTCGCT GGATCGCCGC CCTGCTGGTG
CTCGTGCTGA CCGTGGGCAC CACCATCGGC GTGAGCCTGA TGCTGCCCAA GAACTACACC
GCCTCGGCGG CCGTGGTGCT CGACGTGCGC TCGCCCGACC CGATCGCCGG CATGGTGCTC
GGCGCGATGG CGATGCCGGC CTACATGGCC ACCCAGGTCG ACATCATCCA GAGCGACCGC
GTCGCCCAGC GCGTGGTGCA GGGCCTGCGC CTGACCGAAA ACCCCGAGAC CCGCCAGCAG
TGGCAGGACG CCACCGGCGG CAAGGGCAAC TTCGAGGCCT GGCTGGCCGA CCTGCTCAAG
AAGAAGCTCG ACGTCAAGCC CTCGCGCGAG AGCAACGTCA TCAACATCGG CTACACCAGC
CCCGACCCGC GTTTTGCGGC GGCACTGGCC AACGCCTTCG TGCGCTCGTA CATGGACGTC
AGCATCGGCC TGCGGGTGTC GCCGGCCAAG CAGTACAACG AGTTCTTCGA CGCCCGCGGC
AAGGAACTGC GCGAGGCCCT CGAACAGGCC CAGGCCAAGC TCACCACCTA CCAGAAGACC
AGCGGCATCC TGGCCACCGA CGAGCGTTTC GACGTCGAGA ACCAGCGCCT CAACGAACTC
AGCTCGCAGC TCGTGGCCCT GCAGGCGCTG TCGGCCGAAT CGACCAGCCG CAGCGCGCAG
GCCCGCAACC AGGCCGACCA GCTGGGCGAC GTCATCAACA ACCCGGTGGT GGCCGGCCTG
CGTGCCGACC TGTCGCGCCA GGAAGCGCGC CTGATGGAAA TGAACTCCAA GCTCGGCGAC
GCCCACCCGC AGGTGGTCGA GCTGCGCGCC AACATCGCCG AACTGCGTCA GCGCATCGAC
GGCGAAACCC GCCGCGTCAG CGGCAGCGTG GGCATCAACA ACACCATCAA CAAGGCCCGC
GAAGGCGAAG TCCGCGCCGC CCTCGAAGCC CAGCGCGCCA AGGTGCTGGC GCTCAAGCAG
CAGCGCGACG AGGCGCTGGT GCTGATGAAG GAAGTCGAGA CCGCCCAGCG CGCCTACGAC
CAGGTGGTGG CCCGTGCCAG CCAGACCAAC CTCGAGAGCC AGAACACCCA GACCAACATC
TCGGTGCTCA CGCCCGCCAC CGAGCCGGCC GACCATTCGT CGCCCAAGCT GCTGCTCAAC
GCCTTGCTGA GCGTCTTCCT GGGTACCTTG CTGGCGGTCG GCTTTGCGCT GGTGCGCGAA
CTGATGGACC GCCGCGTGCG CACCGTCGAA GACCTGGCCG AAGGCCTCGG CCTGCCGGTG
CTGGGCGCGC TGCCCAAGCC GATGCGCGGA TCGGCCCGCA GCCCGGCGCT ACAGCTGCCC
ATCAACGTGA TGGCACGCCT TCCCCGTGCC GGCGCCTGA
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| Protein sequence | MTFSQFLSIL KARWIAALLV LVLTVGTTIG VSLMLPKNYT ASAAVVLDVR SPDPIAGMVL
GAMAMPAYMA TQVDIIQSDR VAQRVVQGLR LTENPETRQQ WQDATGGKGN FEAWLADLLK
KKLDVKPSRE SNVINIGYTS PDPRFAAALA NAFVRSYMDV SIGLRVSPAK QYNEFFDARG
KELREALEQA QAKLTTYQKT SGILATDERF DVENQRLNEL SSQLVALQAL SAESTSRSAQ
ARNQADQLGD VINNPVVAGL RADLSRQEAR LMEMNSKLGD AHPQVVELRA NIAELRQRID
GETRRVSGSV GINNTINKAR EGEVRAALEA QRAKVLALKQ QRDEALVLMK EVETAQRAYD
QVVARASQTN LESQNTQTNI SVLTPATEPA DHSSPKLLLN ALLSVFLGTL LAVGFALVRE
LMDRRVRTVE DLAEGLGLPV LGALPKPMRG SARSPALQLP INVMARLPRA GA
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